Brassica napus (rape): 106387985
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Entry
106387985 CDS
T04128
Name
(RefSeq) myosin-12-like isoform X2
KO
K10357
myosin V
Organism
bna
Brassica napus (rape)
Pathway
bna04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
106387985
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bna03019
]
106387985
04131 Membrane trafficking [BR:
bna04131
]
106387985
03029 Mitochondrial biogenesis [BR:
bna03029
]
106387985
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
bna04812
]
106387985
Messenger RNA biogenesis [BR:
bna03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Cargo complex
106387985
mRNA cycle factors
P-body specific factors
106387985
Membrane trafficking [BR:
bna04131
]
Others
Actin-binding proteins
Myosins
106387985
Mitochondrial biogenesis [BR:
bna03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Retention of mitochondria
106387985
Cytoskeleton proteins [BR:
bna04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Myosins
106387985
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myosin_head
DIL
IQ
Myosin_N
nSTAND3
AAA_22
EF-hand_12
CENP-F_leu_zip
DUF3496
AAA_19
AAA_16
ABC_tran
Motif
Other DBs
NCBI-GeneID:
106387985
NCBI-ProteinID:
XP_013683398
LinkDB
All DBs
Position
C3:complement(10080216..10088798)
Genome browser
AA seq
1552 aa
AA seq
DB search
MGTPVNITLGSHVWVEDPEHAWTNGEVTEIKGTNATILTADEKTIVASISSLYPKDTEAP
PAGVDDMTKLAYLHEPGVLHNLACRFSLNEIYTYTGNILIAVNPFQRLPHLYSVHMMEQY
KGAAFGELSPHLFAVADTSYRAMINEAKSQSILVSGESGAGKTETTKMLMRYLAFMGGRS
DTEGRSVEQQVLESNPVLEAFGNAKTVKNNNSSRFGKFVEIQFDKRGKISGAAIRTYLLE
RSRVCQVSDPERNYHCFYMLCAAPPEEVKKFKLGDPRTFHYLNQTNCYEVSNVDDAREYL
ETRNAMDIVGIGQESQDAIFRVVAAILHLGNVNFIKGEDADSSKLRDDKSSYHLQTAAEL
LMCNEKMLEDSLCKRVIVTPDGKITKPLDPESAALNRDALAKTVYSRLFDWIVDKINSSI
GQDPNATSLIGVLDIYGFESFKINSFEQLCINLTNEKLQQHFNQHVFKMEQEEYTREEID
WSYVEFVDNQDVLDLIEKKPGGIIALLDEACMFPKSTHETFAQKMYQTYKGHKRFSKPKL
ARTAFTVNHYAGDVTYSAEFFLDKNKDYVVAEHQALLDASKCSFVANLFPPLPEDASKQS
KFSSIGTRFKQQLQALMETLNTTEPHYIRCVKPNTVLKPSIFENDTVLNQLRCGGVLEAI
RISCAGYPTKRAFDEFLDRFVMLATHVPEGSDEKAACASICDKMGLKGYQIGKTKIFLRA
GQMAELDARRTEVLAGATRLIQRQIRTYLTRKEFLGQKKATIFVQKLLRAQLARKLYQNM
RREAASICIQKNTRAHRARICYTNLQASATVIQTGLRAMDARNKHRHRRRTKAAIIVQRE
WRRHQAHEAYNQYRKSTLALQCLWRAKVARKELKKLKLAARETGALKEAKDKLEKRVEEL
TWRLELEKHQKVDLEEAKAQEIANLQNAFTDLQEKLDEAHAAIIQEKEAAKLAIEQAPPV
IKEVPVVDNTQLELLTSQNNELEVEVDKLKGKLEEFEAVCSELERYNKASLTEAEDAKAK
AIQLQEVIERLQTNQSNLESENQVLRQQALTASTSAVEPEELNSLKDRIAILESENETLR
RQAPAVENTVPNEAVFESAKDLENGHQTEEIQATKEPRTPVTVLAKQSSLTDRQKESHDV
LLTCLTDERRFDNGRSVAAWIIYKTLLQWRSFELEKTNIFDRVVHKIRSSIESQDDTREL
TYWLTTSSTLLYLLQSTLKFSNTNNSASRRNRSSQTTLFGRLVQGMQSSSVGLETSSGYS
GMVGISNDQAMVEAKYPALLFKQHLAAYVEKTYGMIRDSLKKEINPLLNLCIHAPRPMRA
RTLRDVTKGSHLNTTAKQQASYVQWKNITEKLEHTLTLMAENHVPSMITRKLFHQVFSYI
NVQLFNSLLLRRECCSFSNGEYLKMGLHELEQWCLKTEDEAARSPWDELQHIRQAVKFLV
LHQKTQKSLDEITKEICPVLSIPQVYRIGTMFWDDKYGTQGLSPEVIKLMAEDSINMTYP
SFLLDVNSSIPFSVEDVSQSFQGGTISLSNVDPPPLLRQRSDFHFLFQTLPE
NT seq
4659 nt
NT seq
+upstream
nt +downstream
nt
atggggactcctgtaaacatcacacttgggtcacatgtctgggtagaggatccagaacat
gcatggactaatggagaagtgacagagatcaaaggcactaatgcaacaatactcactgca
gatgaaaaaacaattgttgctagtatctctagcctctatccaaaggatacagaggcgccg
cctgcaggagttgatgacatgactaaactggcttacctccatgagccaggggtcctccac
aatcttgcttgccggttttcactaaatgagatatatacttacaccggaaacatcttgatt
gctgtgaatccattccaaagacttcctcatttgtatagcgtccatatgatggagcagtat
aaaggagctgcgtttggagagctaagcccacatctgtttgctgttgcagacactagttac
agggcgatgataaatgaggcaaagagccagtctattttggttagtggagagagtggagct
gggaagacagaaacaaccaaaatgcttatgagatatcttgcattcatgggaggcagatca
gatacagaagggagaagtgttgaacaacaagtcttagagtctaatccagtgttggaagct
tttggaaacgccaaaactgtgaaaaacaacaactcaagtcggtttggaaaatttgttgag
atccaatttgacaagcgtgggaagatatctggagctgcaataagaacttatcttctagaa
cggtcacgtgtttgtcaagtctcagaccctgagaggaactaccactgcttctacatgcta
tgtgcagcaccacctgaggaagtcaagaagttcaagctaggtgatcccaggacgtttcac
tatctgaatcagacaaactgctatgaggtatctaatgtagatgatgcaagagagtatttg
gagaccagaaatgccatggacattgttggtattggacaagagtcacaggatgccatattc
cgcgttgtagctgccatcctccaccttggaaatgtaaattttatcaaaggagaagacgca
gattcttcaaaactcagggatgataagtcaagttatcatcttcaaacagcagcagaacta
ctcatgtgcaatgagaagatgcttgaggattcactctgcaagcgtgtaattgttactcct
gatggtaaaattacaaagccacttgaccctgaatcagcagccttgaaccgtgatgcttta
gccaagacagtgtactccaggttgtttgactggatagtggacaagatcaacagctcaata
ggtcaagatccaaatgctacaagcttgatcggagtcctcgatatttatggttttgaaagc
ttcaagatcaacagttttgagcagctatgcatcaatctcacaaatgagaagttgcaacag
cacttcaaccagcatgtgttcaagatggagcaagaggaatacacaagggaggaaatagac
tggagctatgttgaatttgttgacaaccaagacgtcttagatcttattgagaagaaacca
ggaggcataattgctttactcgatgaagcatgcatgtttcccaagtcgacccatgagacg
tttgcacagaagatgtatcaaacatataaaggacacaagcgtttcagcaaacctaagctt
gccagaacagccttcactgtcaaccactatgcaggagatgttacttactcagcagagttt
tttctcgacaagaacaaggactatgttgtggcagaacatcaagctttgttagatgcatct
aagtgctcttttgtagccaatttgtttccaccattaccagaagacgcatcaaagcagtcc
aagttttcatcaattgggacacgtttcaagcaacaactccaagctctgatggagacgctg
aacacaacagagcctcattatattagatgtgtgaagccaaatacagttctaaagccatcg
atttttgagaatgacaccgttctaaaccaactaagatgtggaggtgtactggaagctata
agaatcagttgtgctggttatccaacaaaacgagcatttgatgaatttcttgatcgtttt
gtgatgctagcaacacacgtaccagaaggatctgatgaaaaggctgcctgtgcatcaata
tgtgacaaaatgggcttaaagggctaccagatagggaaaacaaagatatttcttagggct
ggccagatggctgaactagatgcgcgaagaaccgaggttttggctggtgccactagactc
atccagaggcagatcagaacttatctgacaagaaaagagttccttgggcagaaaaaggct
acaatttttgttcagaaacttttgagagcacaacttgcacgcaagttatatcaaaacatg
cgaagggaagctgcttcaatttgtattcaaaagaacactcgtgctcatagagcaagaata
tgctacactaacctacaggcatcagcaacagttattcagactggtttacgggctatggat
gctcgaaacaaacatagacacagaagaagaacaaaggctgcaattattgttcagagggaa
tggagaagacaccaagctcatgaagcttataaccagtacagaaaatcaacattggcatta
caatgtctgtggagagctaaagtagctcgaaaagagctcaaaaagctcaaattggctgca
agagaaactggggcactcaaggaagccaaagacaagttagagaagcgtgtggaagagcta
acctggcgtctcgaattagagaaacatcaaaaggttgatcttgaagaagctaaagcacaa
gagattgcaaacctacaaaatgctttcactgatttgcaagagaagctagatgaagcccat
gctgcaatcatacaagagaaagaagcagcaaaactagccattgaacaagctccaccagtc
atcaaagaggttccagttgtagacaacactcaactggaattactgaccagtcaaaacaat
gagctggaggttgaggttgataaattaaaaggaaaacttgaggagtttgaagcagtatgt
tctgaacttgagagatataacaaggcaagtctaactgaagcagaagatgcaaaagcaaag
gccattcaacttcaagaggtcattgaaagattacaaacgaaccagtcaaaccttgaatct
gaaaatcaggtcttgcgccagcaggctttgactgcttcaacaagcgcggtagagcctgaa
gagttaaacagcctgaaggacaggattgcaattctagagtcagaaaatgaaactcttcga
agacaagcacctgctgtagagaacacagtgcctaatgaagcagtttttgaatctgcaaag
gatcttgaaaatggacatcaaacagaagagattcaggcaacaaaagagccaaggactcca
gtcactgtgttagcaaaacaaagctctttaacagataggcaaaaggagagccatgatgtt
ctgctgacatgcctcaccgacgaaagaaggtttgataacggaagatctgtggcagcctgg
ataatttacaagacactacttcaatggagatcatttgaactggagaaaacaaatatattt
gatagggttgttcataaaatcagatcatccattgagagccaagatgacacaagggaacta
acttattggctcacaacaagctctaccctcctatatcttctacaatctacactcaagttc
agcaatacaaataactctgcttcaagacgtaacagatcatcccagactacactatttggg
agacttgtgcaaggaatgcaatcatcttcagtgggtttggaaacatccagtggttacagt
gggatggttggaatatcaaatgaccaagccatggttgaagctaaatacccagcgttacta
ttcaagcaacacttagccgcatacgttgagaaaacatatggaatgatccgagatagcttg
aagaaagagataaacccgttactaaatctctgtatccatgcaccaagaccgatgagagcc
aggacattgcgagacgtgactaaaggcagccacttgaacacaactgccaagcaacaagca
tcatatgtacaatggaagaacatcactgaaaagcttgaacatacactgaccttgatggca
gagaatcatgtcccatctatgatcacaagaaaactcttccatcaggttttctcgtacata
aatgtgcagctttttaacagtttgttgcttcgtcgagagtgttgttcctttagcaatgga
gaatatctgaaaatgggcttgcatgaattagagcagtggtgcctgaagacagaagacgag
gcagcacggtcaccatgggatgaacttcaacacattaggcaagcagtgaagtttctggta
ttgcaccaaaagacgcagaagtcactagacgagattacaaaagagatatgtccggtacta
agcattccacaagtgtatcgaattggaactatgttttgggacgacaagtatggaactcaa
ggactctcccctgaggtgatcaaattaatggcggaagattcaatcaacatgacttaccct
tctttcttgctagacgttaactcaagcattcctttctcagtggaagatgtttcacagtcc
ttccagggcgggaccattagcctctccaacgttgatccaccgccgcttctccggcagcga
tctgatttccacttcttgttccagacattgcctgagtaa
DBGET
integrated database retrieval system