Brassica napus (rape): 106388008
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Entry
106388008 CDS
T04128
Name
(RefSeq) protein argonaute 6
KO
K11593
eukaryotic translation initiation factor 2C
Organism
bna
Brassica napus (rape)
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bna03019
]
106388008
03036 Chromosome and associated proteins [BR:
bna03036
]
106388008
Messenger RNA biogenesis [BR:
bna03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
106388008
Chromosome and associated proteins [BR:
bna03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
106388008
RNA interference (RNAi) pathway
RITS (RNA-induced transcriptional silencing) complex
106388008
microRNA pathway
RISC loading complex
106388008
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Piwi
ArgoN
PAZ
ArgoL1
ArgoL2
ArgoMid
Motif
Other DBs
NCBI-GeneID:
106388008
NCBI-ProteinID:
XP_048608416
LinkDB
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Position
C3:10407522..10413043
Genome browser
AA seq
867 aa
AA seq
DB search
MPVTPEEPSRRDYAVTARLGVGSTGRRVQLCTNHFNVSVGQPDVVFYQYTVSITTEDGEN
VQGKGISRKLIDQLYKTYSSDLDGKRLAFDGDKTLYTVGPLPQNDFDFQVILEASFSKRD
CGVSDGGSPSGACKRSKRSFLPRCYRVQIRFSAEIPLKSVLVAQRGVDTSDNSTQDAIRV
LDIVLRQQAAERGCLLVRQAFFHNDMNSVDVGGGVIGIRGFHSSFRPTHGGLSLNIDVST
TMILKPGPVIEFLKANQNVELPRQIDWIKASKMLKHLRVKASHRNMEFKIIGLSAKPCNQ
QLFTMKIKDGECEGQTKEITVYEYFKQTYTEPTYSAYLPCLDVGKPDRPNYLPLEFCNLV
SLQRYTKALSVRQRALLVEKSRQKPLERIKALNDAMHTYCYDKDPFLAGSSISIEKQMTL
AEGRVLNPPTLKFGKNEDFLPSNGRWNFNKKMLLEPRAIKNWAVVNFSFPCDSSHISREL
ISCGMRKGIEIDRPFALVEEEPQSKNLSAVKRVEKMIAKMKSKFPIDPPHFILCVLPERK
NSDIYGPWKKVCLTEAGINTQCICPTKINDQYLTNVLLKINSKLGGINSLLGIECSSNIP
LINKIPTLILGMDVSHGSPGRADVPSVAAVVGSKNWPLISRYRAAVRTQSPKLEMIDSLF
QPVEDPVNGDNGIMNELFVEFFKTSNARKPKQIIIFRDGVSESQFNQVLNIEVDQIIKAY
QRLGETDVPKFTVIVAQKRHHTKLFQAKGHENVPAGTVVDTKIVHPTNYDFYMCAHAGII
GTSRPAHYHVLLDEIGFSPDELQNLIHSLSYVNQRSTTATSIVAPVRYAHLAAAQFAQFT
KFEDISEEKVPELPRLHERVESNMFFC
NT seq
2604 nt
NT seq
+upstream
nt +downstream
nt
atgcctgtaacgccagaagaaccgagccgtcgagattatgcggtcacagctaggcttggt
gttggaagcacaggcaggagagtacagctgtgcaccaatcacttcaatgtctctgttgga
cagccggatgttgttttctaccagtacactgttagtatcaccacagaagacggtgagaat
gtccaagggaagggtataagcagaaagcttattgaccagctttacaagacttactcttct
gatcttgatggtaaaaggttggcctttgatggagacaagactttgtataccgttggtcct
ctgccacagaacgactttgactttcaagtcatcttggaagcttctttttcaaaacgcgac
tgtggcgtctctgatggtggtagtccttctggtgcttgcaagagatcaaagcgctctttc
ctgccaagatgttacagggttcaaattcgtttctctgcagaaatacccttgaagagtgtt
cttgtcgctcagagaggagttgatacatcagataatagcactcaggatgcaattagagtg
cttgacattgtactgaggcagcaagcagctgaaagaggatgcctgttagtcaggcaggca
tttttccataacgatatgaactctgttgatgttggtggaggcgtgataggtattcgaggt
ttccactccagttttcgtccaacccatggaggactctcgcttaacattgacgtgtcaaca
actatgatcttaaaaccaggtccagttatcgaatttctgaaagccaatcagaatgttgag
ttgcctagacagatcgactggattaaggccagcaaaatgctcaaacatctgagggtaaag
gcatcacaccgtaacatggaattcaaaattataggtctaagtgcgaaaccgtgcaatcag
caactatttacaatgaaaattaaagatggcgagtgtgaaggacagactaaagagattact
gtgtatgagtattttaagcaaacttacacagagcctacttattctgcgtacttgccatgc
cttgacgtcggcaagccagatcgccccaactatcttccacttgagttctgtaatcttgta
tctctgcaacgttacacaaaagcattgtcagtgaggcaaagagctttacttgttgaaaag
tcaagacaaaaacccctagagagaattaaagcactcaatgatgcaatgcacacctactgc
tatgataaagatccgtttttagccggaagcagcatatctattgaaaaacaaatgactcta
gctgaaggccgggttctaaatcccccaacgctgaagtttggaaagaatgaggatttttta
cctagcaacggacgctggaactttaacaagaagatgcttctagaaccaagggctattaag
aactgggctgtagtcaacttctcttttccatgcgacagtagtcacatttcccgtgagctc
ataagctgtggcatgaggaaaggcattgaaattgatcgaccttttgcactagttgaagag
gaaccccagtctaaaaacttgagtgctgttaaaagggtagagaaaatgattgcaaagatg
aagtcgaaatttccaatcgatcctcctcatttcattctctgtgtcttgccagaacggaag
aactcagatatctatggtccctggaagaaggtttgtctcacggaagcagggatcaacaca
caatgcatctgccctaccaagatcaatgaccaatatctcaccaatgtacttttgaagata
aattctaagcttggcggcataaattctctgttgggaatagagtgctcttccaacatccca
ttgattaacaaaatacccaccttaatcttgggtatggatgtatctcatgggtctccaggt
cgtgcggatgttccttcagttgcagcggttgttggttcaaaaaactggcccttgatctca
aggtacagggcagctgtgagaactcagtcaccaaaactggagatgattgattcgctcttc
caaccagtcgaggaccctgtgaacggagacaacggtatcatgaacgaattgtttgtggaa
tttttcaagacaagcaacgcgcgaaagccaaagcagattatcatattcagggatggagta
agtgaatcacagttcaaccaagtcttgaacattgaggtggatcagattataaaggcgtat
caacgtcttggtgaaaccgatgtgccgaaattcactgtcatcgtggctcagaaaagacac
cacaccaagttgttccaagctaagggtcatgaaaatgttcctgcaggaaccgtagtggac
accaagattgtacatccgaccaactacgatttttacatgtgtgctcatgcagggataata
ggaacttcaagaccggctcactatcatgtcttgctggatgagattggtttctctcccgat
gagttgcagaacctcatccattctctctcctatgtcaaccagcggagcacgactgcaacc
tcaattgtggctccagttagatacgctcatctcgcagcagctcaatttgcgcagttcaca
aagtttgaagatatatcggaagagaaagtcccggagcttccgcgtttgcacgagagagtc
gaaagcaacatgttcttctgctga
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