KEGG   Brassica napus (rape): 106388037
Entry
106388037         CDS       T04128                                 
Name
(RefSeq) protein DAMAGED DNA-BINDING 2
  KO
K10140  DNA damage-binding protein 2
Organism
bna  Brassica napus (rape)
Pathway
bna03420  Nucleotide excision repair
bna04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:bna00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    106388037
  09124 Replication and repair
   03420 Nucleotide excision repair
    106388037
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:bna04121]
    106388037
   03400 DNA repair and recombination proteins [BR:bna03400]
    106388037
Ubiquitin system [BR:bna04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul4 complex
    Target recognizing subunit (DCAF)
     106388037
DNA repair and recombination proteins [BR:bna03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     Cul4-DDB2 complex
      106388037
SSDB
Motif
Pfam: WD40_Prp19 WD40 WD40_CDC20-Fz Beta-prop_EIPR1 Beta-prop_EML Beta-prop_RIG_2nd Beta-prop_EML_2 WD40_WDHD1_1st Beta-prop_TEP1_2nd WDR55 EIF3I WD_LRWD1 WD40_MABP1-WDR62_2nd Beta-prop_WDR90_POC16_2nd WD40_RFWD3 Beta-prop_IFT140_1st Beta-prop_NUP159_NUP214
Other DBs
NCBI-GeneID: 106388037
NCBI-ProteinID: XP_013683468
UniProt: A0A816K4D2
LinkDB
Position
C2:7060242..7064875
AA seq 553 aa
MGLTRNRRKKEPEIVIARDTESSSSEEEEEEDDDDYPLSESEKGDEAVKIELEKSKAKGK
APITVKLKKVCKVCKQPGHEAGFKGATYIDCPMKPCFLCKMPGHTTMSCPHRVVTDHRIL
PTSHRNTKNPIDFVFMRQLQPRIPPIKPPYVIPDQVHCAVIRYHSRRVTCLEFHPTRNNI
LLSGDKKGQIGVWDFAKVYEKSVYGNIHSVQVNNMRFSPTNDDMVYSASSDGNIGYTDLE
TGTSSTLLNLNPNGWQGPTTWKMLYGLDINSDKGLVLAADNFGLLHMIDHRSNNVTGEPI
LIHKKGSKVVGLDCNPVHPELLLSCGNDHFARIWDMRKLQPGESLNDLAHKRVVNSAYFS
PSSGTKILTTSQDNRIRVWDSIFGDLDSPSREIVHSHDFNRHLTPFKAEWDPKDASESLI
VVGRYISENYNGAALHPIDFIDSSNGQLVAEVMDPNITTITPVNKLHPRDDVLASGSSRS
LFIWRPEEKTEMVEEKEKKEKKIVICYGDSDKKGKKQKRGSDDEDEDDDMFSSKGKNIKA
KAKTTKSTRRTKA
NT seq 1662 nt   +upstreamnt  +downstreamnt
atgggtttaacgaggaacagaagaaaaaaggaaccagaaatcgtcattgccagggataca
gagtcaagttcgtccgaagaggaagaagaagaagatgatgatgattaccctttgtcggag
tctgagaaaggagatgaagcggtcaaaatcgaattggagaagagtaaagcaaaagggaaa
gcacccattaccgttaagctcaagaaagtttgcaaagtctgtaaacagcctggtcatgaa
gctgggtttaaaggagcaacttatatcgattgtcctatgaaaccttgcttcttatgtaaa
atgcctggtcacaccacaatgtcatgtcctcatagagtggttactgaccataggatactc
ccaacttctcataggaatacaaagaaccctatagactttgtgttcatgcgtcagctccaa
ccgaggattccaccgattaaaccaccgtatgtgatcccggatcaagtgcattgtgcagtt
attcgataccacagcagacgtgttacatgtttggagtttcacccaacaaggaacaacatt
cttctctctggagataagaaagggcaaattggagtctgggattttgctaaagtgtatgag
aagagtgtgtacggaaacatacactctgtacaagttaataatatgcggtttagtcccaca
aatgatgacatggtttattccgcatcctctgatggaaatattggttacactgacttggaa
actggaacttcatcaactttgctgaatctcaaccccaatggatggcagggcccaactact
tggaaaatgctgtacggtttggatataaactcggataaaggtttggtcctagctgctgat
aatttcgggttacttcacatgatcgaccaccggtccaataacgtaacgggagagcccatt
ttgatacacaagaaaggtagcaaagttgttggccttgactgcaacccggttcaccctgag
cttcttcttagctgtggaaacgatcattttgcaagaatctgggacatgcgtaaactacaa
cctggagaatctcttaatgatcttgcgcacaagcgagtagtcaactccgcttatttctct
ccatcatcaggcacaaagattctcacaacctcgcaggacaaccgtattcgagtatgggac
tctatctttggggacttggattccccaagccgagagattgttcatagccatgatttcaat
aggcatttgacaccgttcaaagctgaatgggatcctaaggatgcctcggagtcactcatt
gtggttggtcgttacataagtgaaaactacaacggagctgctctccacccaatagacttc
atcgattcaagcaacggacagttggttgcagaggtcatggatccgaacataacgactatt
actccagtcaacaagttgcatcctcgcgacgatgttttagcctctggaagctcaaggtcg
ctgttcatttggcggccagaagagaagacggagatggttgaggagaaggagaagaaggag
aagaagattgttatatgttatggtgacagcgataagaaaggcaaaaagcaaaagcgtggc
agcgatgatgaagatgaggatgacgatatgtttagctctaaaggcaaaaacattaaggct
aaagccaaaacaaccaaatctactcgcaggacaaaagcttaa

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