Brassica napus (rape): 106388037
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Entry
106388037 CDS
T04128
Name
(RefSeq) protein DAMAGED DNA-BINDING 2
KO
K10140
DNA damage-binding protein 2
Organism
bna
Brassica napus (rape)
Pathway
bna03420
Nucleotide excision repair
bna04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
106388037
09124 Replication and repair
03420 Nucleotide excision repair
106388037
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
bna04121
]
106388037
03400 DNA repair and recombination proteins [BR:
bna03400
]
106388037
Ubiquitin system [BR:
bna04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
106388037
DNA repair and recombination proteins [BR:
bna03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Cul4-DDB2 complex
106388037
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_Prp19
WD40
WD40_CDC20-Fz
Beta-prop_EIPR1
Beta-prop_EML
Beta-prop_RIG_2nd
Beta-prop_EML_2
WD40_WDHD1_1st
Beta-prop_TEP1_2nd
WDR55
EIF3I
WD_LRWD1
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
WD40_RFWD3
Beta-prop_IFT140_1st
Beta-prop_NUP159_NUP214
Motif
Other DBs
NCBI-GeneID:
106388037
NCBI-ProteinID:
XP_013683468
UniProt:
A0A816K4D2
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Position
C2:7060242..7064875
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AA seq
553 aa
AA seq
DB search
MGLTRNRRKKEPEIVIARDTESSSSEEEEEEDDDDYPLSESEKGDEAVKIELEKSKAKGK
APITVKLKKVCKVCKQPGHEAGFKGATYIDCPMKPCFLCKMPGHTTMSCPHRVVTDHRIL
PTSHRNTKNPIDFVFMRQLQPRIPPIKPPYVIPDQVHCAVIRYHSRRVTCLEFHPTRNNI
LLSGDKKGQIGVWDFAKVYEKSVYGNIHSVQVNNMRFSPTNDDMVYSASSDGNIGYTDLE
TGTSSTLLNLNPNGWQGPTTWKMLYGLDINSDKGLVLAADNFGLLHMIDHRSNNVTGEPI
LIHKKGSKVVGLDCNPVHPELLLSCGNDHFARIWDMRKLQPGESLNDLAHKRVVNSAYFS
PSSGTKILTTSQDNRIRVWDSIFGDLDSPSREIVHSHDFNRHLTPFKAEWDPKDASESLI
VVGRYISENYNGAALHPIDFIDSSNGQLVAEVMDPNITTITPVNKLHPRDDVLASGSSRS
LFIWRPEEKTEMVEEKEKKEKKIVICYGDSDKKGKKQKRGSDDEDEDDDMFSSKGKNIKA
KAKTTKSTRRTKA
NT seq
1662 nt
NT seq
+upstream
nt +downstream
nt
atgggtttaacgaggaacagaagaaaaaaggaaccagaaatcgtcattgccagggataca
gagtcaagttcgtccgaagaggaagaagaagaagatgatgatgattaccctttgtcggag
tctgagaaaggagatgaagcggtcaaaatcgaattggagaagagtaaagcaaaagggaaa
gcacccattaccgttaagctcaagaaagtttgcaaagtctgtaaacagcctggtcatgaa
gctgggtttaaaggagcaacttatatcgattgtcctatgaaaccttgcttcttatgtaaa
atgcctggtcacaccacaatgtcatgtcctcatagagtggttactgaccataggatactc
ccaacttctcataggaatacaaagaaccctatagactttgtgttcatgcgtcagctccaa
ccgaggattccaccgattaaaccaccgtatgtgatcccggatcaagtgcattgtgcagtt
attcgataccacagcagacgtgttacatgtttggagtttcacccaacaaggaacaacatt
cttctctctggagataagaaagggcaaattggagtctgggattttgctaaagtgtatgag
aagagtgtgtacggaaacatacactctgtacaagttaataatatgcggtttagtcccaca
aatgatgacatggtttattccgcatcctctgatggaaatattggttacactgacttggaa
actggaacttcatcaactttgctgaatctcaaccccaatggatggcagggcccaactact
tggaaaatgctgtacggtttggatataaactcggataaaggtttggtcctagctgctgat
aatttcgggttacttcacatgatcgaccaccggtccaataacgtaacgggagagcccatt
ttgatacacaagaaaggtagcaaagttgttggccttgactgcaacccggttcaccctgag
cttcttcttagctgtggaaacgatcattttgcaagaatctgggacatgcgtaaactacaa
cctggagaatctcttaatgatcttgcgcacaagcgagtagtcaactccgcttatttctct
ccatcatcaggcacaaagattctcacaacctcgcaggacaaccgtattcgagtatgggac
tctatctttggggacttggattccccaagccgagagattgttcatagccatgatttcaat
aggcatttgacaccgttcaaagctgaatgggatcctaaggatgcctcggagtcactcatt
gtggttggtcgttacataagtgaaaactacaacggagctgctctccacccaatagacttc
atcgattcaagcaacggacagttggttgcagaggtcatggatccgaacataacgactatt
actccagtcaacaagttgcatcctcgcgacgatgttttagcctctggaagctcaaggtcg
ctgttcatttggcggccagaagagaagacggagatggttgaggagaaggagaagaaggag
aagaagattgttatatgttatggtgacagcgataagaaaggcaaaaagcaaaagcgtggc
agcgatgatgaagatgaggatgacgatatgtttagctctaaaggcaaaaacattaaggct
aaagccaaaacaaccaaatctactcgcaggacaaaagcttaa
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