KEGG   Brassica napus (rape): 106388250
Entry
106388250         CDS       T04128                                 
Name
(RefSeq) histone-binding protein MSI1
  KO
K10752  histone-binding protein RBBP4
Organism
bna  Brassica napus (rape)
Pathway
bna03082  ATP-dependent chromatin remodeling
bna03083  Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:bna00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    106388250
   03083 Polycomb repressive complex
    106388250
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:bna03036]
    106388250
Chromosome and associated proteins [BR:bna03036]
 Eukaryotic type
  Nucleosome assembly factors
   Histone chaperones
    CAF-1
     106388250
  Histone modification proteins
   HAT complexes
    HATB complex
     106388250
   HDAC complexes
    Sin3A-HDAC complex
     106388250
   Polycomb repressive complex (PRC) and associated proteins
    PRC2.1
     106388250
    PRC2.2
     106388250
  Centromeric chromatin formation proteins
   Kinetochore proteins
    MIS16-MIS18 complex
     106388250
  Heterochromatin formation proteins
   Other heterochromatin formation proteins
    106388250
  Chromatin remodeling factors
   NuRD complex
    106388250
   NuRF complex
    106388250
   NuRF complex (fruit fly)
    106388250
SSDB
Motif
Pfam: WD40 CAF1C_H4-bd WD40_CDC20-Fz WD40_Prp19 Beta-prop_CAF1B_HIR1 Beta-prop_RIG_2nd Beta-prop_EML_2 Beta-prop_EIPR1 WD40_WDHD1_1st WDR55 Beta-prop_TEP1_2nd EIF3I Beta-prop_WDR75_1st Beta-prop_EML Beta-prop_WDR90_POC16_2nd WD40_MABP1-WDR62_2nd WD40_RFWD3 WD_LRWD1 eIF2A NBCH_WD40 Beta-prop_DCAF12 ANAPC4_WD40 Beta-prop_RIG_1st WD40_MABP1-WDR62_1st Beta-prop_SPT8 Beta-prop_HPS5 Beta-prop_WDR19_1st Nbas_N
Other DBs
NCBI-GeneID: 106388250
NCBI-ProteinID: XP_013683734
UniProt: A0A816JWB7
LinkDB
Position
C2:complement(7308989..7311275)
AA seq 419 aa
MAKDDEEMREEIEERLISEEYRIWKKNTPFLYDLVIAHLLEWPSLTVEWLPDREEPSGKD
YSVQKMILGTHTHVNESNYLMLAQVQLPLDDAEYDDERAEFGGFGSATGKVQVIQKINHE
GELNRARYMPQNPFMIATKTVNAEVYVFDYSKHPSKPALDGACNPDLRLRGHSSEGYGLS
WSTLKQGHLLSGSDDAQICLWDINATPKNKTLDAHQIFKAHEGAVEDVAWHLRHEYLFGS
VGDDQYFFIWDLRSPSASRPVQSVAAHSMEVNCLAFNPLNEWIVATGSTDKTVKLFDLRR
LSNALHSFDGHKEEVFQVGWSPKNETILASCCFGRRLMVWDVNRIDEEQTAEAAEDGPPE
LLFTHGGYAAKISDFSWNPCDDWVISSVSEDNILQIWQMTETIYHDEDDAPGEEPLRGS
NT seq 1260 nt   +upstreamnt  +downstreamnt
atggcgaaagacgacgaggagatgcgagaagagatcgaggagcgactgatcagcgaagag
tacaggatctggaagaagaacactcctttcctctacgatctcgtcatcgcccacctcctc
gagtggccttcccttactgtcgaatggctccccgaccgcgaggagccgtccgggaaagac
tactccgtccagaagatgattctcggcacccacacccacgtgaacgagtccaattacctg
atgctggctcaggttcagcttccccttgacgacgccgagtacgacgatgagagggccgag
tttggtgggtttggctccgccaccggaaaggtgcaagttattcagaaaataaatcacgaa
ggggagctgaaccgagctcgctacatgcctcagaaccctttcatgattgctaccaagacg
gttaatgcggaggtgtatgtgtttgattacagcaagcacccttctaagccagcgcttgat
ggtgcttgcaaccctgatctgaggctcagaggtcacagctctgaagggtatggcctgtct
tggagtacgctcaagcagggtcatttgctcagcggctctgatgacgctcagatctgcttg
tgggatattaacgccactcctaagaacaagactcttgacgctcaccagatctttaaggct
catgaaggcgcagtggaagatgttgcatggcatctgagacatgaatacctgtttggatcc
gttggagatgatcagtatttttttatatgggatctgcgttctccatctgccagtagacca
gtacagtctgtggctgctcactccatggaggttaactgcttagccttcaatccacttaat
gagtggattgtggcgacagggtcaactgataagactgttaaattattcgatctgcggagg
ttaagcaatgctcttcactcatttgatggccataaagaggaggttttccaagttggttgg
agcccgaaaaacgagactatcttagcctcatgttgcttcggtagaagacttatggtttgg
gatgttaacaggattgatgaggagcagacagcagaggctgcggaggacggcccaccagag
ctgctgtttacacatggtggttacgccgccaaaatttcagatttctcatggaacccttgt
gacgattgggtaatttccagtgtatctgaggacaacatactccaaatatggcaaatgact
gagaccatatatcatgatgaggatgatgctccaggggaagaaccattaagaggttcctag

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