Brassica napus (rape): 106388350
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Entry
106388350 CDS
T04128
Name
(RefSeq) citrate synthase 4, mitochondrial
KO
K01647
citrate synthase [EC:
2.3.3.1
]
Organism
bna
Brassica napus (rape)
Pathway
bna00020
Citrate cycle (TCA cycle)
bna00630
Glyoxylate and dicarboxylate metabolism
bna01100
Metabolic pathways
bna01110
Biosynthesis of secondary metabolites
bna01200
Carbon metabolism
bna01210
2-Oxocarboxylic acid metabolism
bna01230
Biosynthesis of amino acids
Module
bna_M00009
Citrate cycle (TCA cycle, Krebs cycle)
bna_M00010
Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate
bna_M00012
Glyoxylate cycle
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
106388350
00630 Glyoxylate and dicarboxylate metabolism
106388350
Enzymes [BR:
bna01000
]
2. Transferases
2.3 Acyltransferases
2.3.3 Acyl groups converted into alkyl groups on transfer
2.3.3.1 citrate (Si)-synthase
106388350
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Gene cluster
GFIT
Motif
Pfam:
Citrate_synt
PHY
Motif
Other DBs
NCBI-GeneID:
106388350
NCBI-ProteinID:
XP_013683856
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Position
C3:15312152..15316611
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AA seq
475 aa
AA seq
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MVFFRSVAAFTRLRSRVGQQSSLGSSVRWIQMQSSTDVDLKSQLQELIPEQQDRLKKLKS
EHGKVQLGNITVDMVIGGMRGMTGLLWETSLLDPEEGIRFRGLSIPECQKVLPAAQSGGE
PLPEGLLWLLLTGKVPSKEQVEALSKDLANRAAVPDYVYNAIDALPSTAHPMTQFASGVM
ALQVQSEFQKAYENGIQKSKFWEPTYEDCLNLIARVPVVAAYVYRRMYKNGDSIPSDKSL
DYGANFSHMLGFDDAKMKELMRLYITIHSDHEGGNVSAHTGHLVGSALSDPYLSFAAALN
GLAGPLHGLANQEVLLWIKSVVEECGENISKDQLKEYVWKTLNSGKVVPGYGHGVLRKTD
PRYMCQREFALKHLPDDPLFQLVSKLYEVVPPVLTELGKVKNPWPNVDAHSGVLLNHYGL
TEARYYTVLFGVSRSLGICSQLIWDRALGLALERPKSVTMDWLEAYCKKAKASSP
NT seq
1428 nt
NT seq
+upstream
nt +downstream
nt
atggtgtttttccgcagcgtagcggcctttactaggctgaggtctcgcgttgggcaacaa
tcttcgctcggcagttcagtcagatggattcagatgcagagctccaccgatgtggacctg
aagtcgcagctgcaagagttgattccggaacaacaagaccgcctgaagaaactgaagtca
gaacatgggaaggtccaactgggaaacatcactgttgatatggtaattggtggaatgaga
gggatgactggattgctctgggaaacctcgctgcttgacccggaagagggaatacgcttt
aggggcttgtcaattcctgagtgccagaaagtattacctgctgcccagtctggaggggaa
ccattgcccgagggtctattgtggcttcttttaactggaaaggtacctagcaaagagcaa
gttgaagcactgtcaaaagacttggcgaaccgtgctgctgtgccagattatgtttataat
gccatcgatgccctgccttccacagctcatccaatgactcaatttgctagcggtgttatg
gctctccaggtgcaaagtgagttccaaaaggcatatgagaatggaattcaaaagtcaaag
ttctgggagccaacatacgaggattgcctcaacctgattgcgcgtgttcctgttgtagct
gcatatgtttatcggaggatgtataagaatggcgattccattccctcggataaatctttg
gattatggtgcaaacttctcccacatgttaggatttgatgatgctaagatgaaagagctc
atgaggctttacatcactatccacagtgatcatgaaggtggaaatgttagtgctcacact
ggtcacctggtcggtagtgcactttcagatccgtatctgtcatttgcagctgcattaaac
ggtttagctgggccactccatggtttggctaatcaggaagttttgctttggatcaaatca
gttgtggaggaatgtggagaaaacatatcgaaagaccagttgaaagaatatgtctggaaa
acattaaacagtggcaaggttgttcctggatatggacatggtgttcttcgcaaaactgat
ccaagatatatgtgccaaagagagtttgcgttgaagcatttacctgatgaccctcttttc
cagctggtatcaaagctttatgaagttgtgcctcctgttctcaccgaactcggaaaggtg
aagaacccatggccaaatgttgatgctcacagtggagtgttgctcaaccactatggtcta
accgaagcaaggtactacacggtgctctttggtgtctcaaggagtcttggtatctgctct
cagctaatatgggacagagctcttggacttgcacttgagaggccaaagagtgttacaatg
gactggcttgaagcctactgtaagaaagcaaaagcttcatctccttaa
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