Brassica napus (rape): 106388668
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Entry
106388668 CDS
T04128
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 14
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
bna
Brassica napus (rape)
Pathway
bna03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
106388668
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
bna03041
]
106388668
03009 Ribosome biogenesis [BR:
bna03009
]
106388668
Enzymes [BR:
bna01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
106388668
Spliceosome [BR:
bna03041
]
Complex A
U1 snRNP components
U1 related factors
106388668
Complex B
106388668
Ribosome biogenesis [BR:
bna03009
]
Eukaryotic type
Pre-60S particles
Helicases
106388668
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
WW
ERCC3_RAD25_C
Motif
Other DBs
NCBI-GeneID:
106388668
NCBI-ProteinID:
XP_013684246
UniProt:
A0A816IAC8
LinkDB
All DBs
Position
C3:22914125..22917895
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AA seq
635 aa
AA seq
DB search
MAATAPSAVRYAPEDHSLPKPWKGLVDDRTGYLYFWNPETNVTQYERPQPPSNLPLSSSS
VQVPQASAVPNGSSYAPAKGGDDKYSRATSDGGPRRSRFSEIDDRSGAPYLNGAANGLGN
SLPPSSAPVNDISPEAYCRRHEITVSGGQVPPPLMSFETTGFPPELLREVLNAGFSAPTP
IQAQSWPIAMQGRDIVAIAKTGSGKTLGYLLPGFMHLQRVRNDSRMGPTILVLSPTRELA
TQIQDEAVKFGRSSRISCTCLYGGAPKGPQLRDLERGADIVVATPGRLNDILEMRRISLR
QVSYLVLDEADRMLDMGFEPQIRKIVKEIPTKRQTLMYTATWPKGVRKIAADLLVNPAQV
NIGNVDELVANKSITQHIEVVAPMEKQRRLEQILRSQEPGSKVIIFCSTKRMCDQLTRNL
TRQFGAAAIHGDKSQPERDNVLNQFRSGRTPVLVATDVAARGLDVKDIRAVINYDFPNGV
EDYVHRIGRTGRAGATGQAFTFFGDQDSKHASDLIKILEGANQRVPPQIRDMAARGGGGM
NKFSRWGPPSGGRGGGSGYGGRGGGSGYGGRGSDSGYGGRGGFDSRDSGMGSRSSNGWGR
ERERSRSPERFNRVPPPSSTGSPPRSFHEAMMKHR
NT seq
1908 nt
NT seq
+upstream
nt +downstream
nt
atggctgctaccgctccttccgcagtccgttatgctcccgaggatcattctcttcccaag
ccgtggaagggccttgttgatgatcgaactggatacttgtacttttggaatcccgagacc
aacgttactcaatacgagcgacctcaacctccttccaacttacctttaagctcctcctcc
gttcaggttcctcaagcctctgccgtaccaaatggtagtagctatgctcctgccaagggt
ggtgatgataagtactctagagccaccagtgacggtgggcctaggcgctcgaggtttagt
gagattgatgacaggagtggagcgccgtatttgaatggggctgccaatggacttgggaac
tctcttcctccttcatcagctccagttaatgatatttctccggaggcctattgccgccgt
catgaaattaccgtcagtgggggccaagtaccaccacctctaatgtcctttgaaactact
ggttttcctcctgagcttctgcgcgaggtactcaatgcaggtttctctgctccaactcca
attcaagctcagtcgtggccaattgcgatgcaaggtagggacatagttgccattgctaaa
actggctcgggaaaaactttgggttacttacttcctggattcatgcatcttcaacgcgtc
cggaatgattcgcgaatgggcccaacaatcctggtactgtctccaaccagggagcttgcc
acacaaatccaagacgaagctgttaaatttgggaggtcgtcaagaatttcgtgcacatgc
ttgtatggtggtgcaccgaagggtccccagctaagggatttggaaagaggagctgatata
gtggttgcaactccgggacggttgaatgacatccttgagatgaggagaattagtctgcgt
caagtatcttatcttgtgctggatgaggcagatagaatgttggacatgggtttcgaaccg
caaataaggaagattgtgaaagagattcctactaagcgccaaactcttatgtacacagct
acatggccaaagggagtcaggaagattgcagcggacttgcttgttaaccctgctcaggtc
aacattggtaacgtcgacgagcttgtggctaacaagtcgatcacacagcacattgaagtg
gtagcaccaatggagaaacagaggaggttagagcagatattgaggtctcaggaaccaggc
tcgaaggtgataatattctgctcaaccaaaaggatgtgcgaccagctaactcgcaatctg
acccgccaatttggagctgctgccatacatggagacaagtcacagcctgagagagacaat
gttctgaatcagttccgtagtggcaggactccggttcttgttgcaactgatgttgctgct
cgtgggctggacgttaaggacatcagggcggttataaactatgatttccccaatggagtg
gaagactatgtgcatagaatcggaagaacaggaagagctggagcgactggtcaggcattc
acattctttggcgatcaagactcgaaacatgcttcggatctaatcaagatcttggaagga
gcaaaccagcgagttcctcctcagatccgcgatatggctgcacgtggtggcggtggaatg
aacaaattcagccgttggggtccaccttccggaggtcgaggtggcggctctggttatggt
ggcagaggtggcggctctggttatggtggcagaggtagcgactctggttatggtggcaga
ggtggctttgattcacgtgacagtggaatgggaagtagaagcagcaatggatggggaaga
gagcgtgaaaggagtcgtagcccggagagattcaacagagttccaccaccgtcttctact
ggatctcctcctcgcagcttccatgaagccatgatgaaacaccgataa
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