Brassica napus (rape): 106388726
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Entry
106388726 CDS
T04128
Name
(RefSeq) E3 ubiquitin-protein ligase TRAIP-like
KO
K11985
TRAF-interacting protein [EC:
2.3.2.27
]
Organism
bna
Brassica napus (rape)
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
bna04121
]
106388726
Enzymes [BR:
bna01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
106388726
Ubiquitin system [BR:
bna04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
106388726
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-RING_UBOX
zf-C3HC4
zf-rbx1
zf-RING_5
zf-ANAPC11
zf-RING_11
zf-C3HC4_2
zf_RING_Vps8
zf-RING_16
RINGv
zf-UDP
FIMAH
zf-C3HC4_3
FANCL_C
DUF948
DUF7413
Motif
Other DBs
NCBI-GeneID:
106388726
NCBI-ProteinID:
XP_013684326
LinkDB
All DBs
Position
C3:22617425..22620283
Genome browser
AA seq
502 aa
AA seq
DB search
MAGENAASNAICSICYEDLKPVAENLQSISACGHVFHELCLQQWFEYCPSTNKRNCPICK
QKCHLKDPFRLYFQSSGNQTDSIASQKVEEDPVLLRGEVKRLQGKIQNLASALEGQQKQN
LEVSDQLHQCKEQLKEDKARRWEALQEISTTQLLLKVKSEECVQLTSKCAKLQDRTMALA
KELAALKLVSDLSLDEDDVMKLAMLGNNAKTKDTIDTLVKSLVIRNRSYKELLAKCNQLG
RGEARSSEKLEKAMEKMDRLKKRVRELEMIAEESENRALREIKVSKNCSDRQVSKPATES
FVSFRMPPSGNIVEKISTPLGKFEKNDGFTIPESCLWGRGDSISGKPESVIEIDDDVPET
TNSGFRYSDSVMKDEKSEDSNVQDDPVIKDIKFNIRESPASSVSTRNNGAGDIWLSSGKN
QNLRRWETSPSLGGYVSGKNDLISVGPDGKGGRIKVLRSKPQFSNANASSGSGKRFKVGS
KTSGSSSQGCLQIEHFFAKSNR
NT seq
1509 nt
NT seq
+upstream
nt +downstream
nt
atggccggcgaaaacgcggcgtcgaatgcaatatgttcaatctgttacgaagatctgaaa
ccggtggctgagaatctgcaatcgatctccgcctgtggccacgtctttcacgaactatgt
ttgcagcaatggttcgagtactgcccgagcacgaacaagcgaaactgtccgatttgcaag
cagaagtgccacctaaaggatcctttccggctctactttcaatcttccgggaaccaaacc
gattcgattgcatcgcagaaagtcgaggaagatccggtcttgttgagaggagaagtgaag
cggctccaagggaagatacagaaccttgcttcagctctggaggggcagcaaaagcagaat
cttgaagtctccgaccagttgcatcagtgcaaggagcaattgaaggaggacaaagcaaga
aggtgggaggctctacaagagatatcaacgacacaactcttgcttaaagtaaagtcagag
gaatgtgttcagcttacttctaagtgcgctaagctacaagacaggactatggctcttgcc
aaggagctcgctgcgcttaaactggtttccgatctaagcttggatgaagatgatgttatg
aagctcgccatgctagggaataatgcaaagaccaaagatactatagatacacttgtcaag
tccttggttatccgaaacaggagttataaagagttgctggccaaatgcaatcagctgggt
agaggagaagctcggtcttctgagaaacttgagaaagctatggaaaagatggatagacta
aagaagcgagtgagggaacttgagatgatcgctgaagagagtgagaacagagctctaagg
gaaataaaagtttcaaagaactgcagtgacagacaagtctccaagcctgcaacagagagc
tttgtttctttcagaatgcctccatcaggcaacatagttgagaaaatctctacaccactt
ggtaaatttgagaagaatgatggcttcaccattcctgaatcgtgcttatggggaagagga
gactctatttctggtaaaccggagtctgttatcgagatagatgatgatgttcctgaaacc
acaaattctggcttcagatattcggattctgttatgaaagatgagaagagtgaagatagt
aatgttcaggatgatcccgtgatcaaggatataaagtttaacatcagagaaagtccggca
tcatcagtctcaactcggaacaatggtgctggagacatttggttgtcaagtgggaaaaat
caaaatctcagaagatgggaaacgagtccttcactaggaggttatgtctcaggcaagaat
gatctaatctctgttggacctgatgggaaaggtggaagaatcaaggtgttgagatccaaa
ccccaattttctaacgccaatgcaagctcaggaagtggtaagagattcaaggttggaagt
aaaacaagtggctcgtcgtctcaagggtgtctgcagatcgaacatttttttgcgaaatcc
aatcgctaa
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