KEGG   Brassica napus (rape): 106388828
Entry
106388828         CDS       T04128                                 
Name
(RefSeq) WD repeat-containing protein 48
  KO
K15361  WD repeat-containing protein 48
Organism
bna  Brassica napus (rape)
Pathway
bna03460  Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:bna00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03460 Fanconi anemia pathway
    106388828
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:bna03400]
    106388828
DNA repair and recombination proteins [BR:bna03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   FA (Fanconi anemia) pathway
    Other FA pathway factors
     106388828
SSDB
Motif
Pfam: WD40 WD40_Prp19 DUF3337 WD40_CDC20-Fz WD40_WDHD1_1st WDR55 Beta-prop_TEP1_2nd EIF3I Beta-prop_EML Beta-prop_EML_2 Beta-prop_WDR75_1st Beta-prop_CAF1B_HIR1 NBCH_WD40 Beta-prop_SPT8 Beta-prop_SCAP WD40_MABP1-WDR62_2nd Beta-prop_TEP1_C Beta-prop_WDR90_POC16_2nd Beta-prop_IFT122_1st Beta-prop_EIPR1 WD40_RFWD3 WD40_MABP1-WDR62_1st Beta-prop_RIG_2nd Beta-prop_DCAF4 RAWUL
Other DBs
NCBI-GeneID: 106388828
NCBI-ProteinID: XP_013684437
UniProt: A0A816I710
LinkDB
Position
C3:complement(23770151..23775470)
AA seq 754 aa
MHRVASSGSNGGSVRNRKEKKLTYVLNDGNDSKHCAGVNCLDVLKSSVSGDQSYLFTGSR
DGTLKRWAFDEDASFCSATFESHVDWVNDAALAGESTLVSCSSDTTVKTWDSLSDGACTR
TFRQHTDYVTCLAVAAKNSNVVASGGLGGEVFIWDIEAALSPVAKPNDAMEEGSTNGLGN
SQPVTSLRNVGSSNNISVQSSPSHGYAPTIAKGHKESVYALAMNDAGTMLVSGGTEKVLR
VWDPRSGSKTMKLRGHTDNVRVLLLDSTGRFCLSGSSDSMIRLWDLGQQRCLHTYAVHTD
SVWALACTPSFTHVYSGGRDQSLYLTDLATRESVLMCTKEHPIQQLALQDDSIWVATIDS
SVERWPAEVQSPEKVFQRGGSFLAGNLSFNRARVSLEGLNPPPAYKEPLMTIPGSHPIVQ
HEILNNKRQILTKDAGDSVKLWDITKGVVVEDFGKISFEEKKEELFEMVSIPSWFTVDTR
LGCLSLHLETPQCFSAEMYSADLKVSGRPEDDKINLGRETLKGLLGHWMAKKKHKPKPQA
LTSGDVLSVKDTKKNLNASKSEDSSAGNDPVYPPFEFPSISPPSIITEGSQGGPWRKKIT
EFTGTEDEKDFPLWCLDAVLNNRLPPRENTKLSFFLHPCEGSNVQVVTLGKLSAPRILRV
HKVTNYVVEKMVLDSPLDSLATDGASVSGGPQQLFAGNGLLTPGSKPWQKLRPSIEILCN
NQVLSPEWSLATVRTFIWKKPEDLILNYRVAIAK
NT seq 2265 nt   +upstreamnt  +downstreamnt
atgcaccgggttgcaagttcagggagtaatggcggttctgtccgcaatcgcaaagagaag
aagcttacctatgtcttaaacgatggcaacgactcaaagcactgtgctggcgttaattgc
ttggatgtgttgaagtcgtctgtttccggtgatcagagctacctcttcactggaagtcgt
gatggtacacttaagagatgggcttttgatgaggatgcgtccttttgctcagctaccttt
gagtctcatgttgattgggtgaatgacgctgctttggctggtgaaagcactcttgtttct
tgttcttcagacactactgtcaagacatgggacagcttatcagatggagcctgtacgagg
actttccgtcagcacacggactatgttacttgtctggcagttgcggcaaaaaatagcaat
gttgttgcatctggtggccttggcggggaggttttcatatgggacatcgaagctgcttta
tcaccagttgcgaaacctaatgatgcaatggaagaaggttctacaaatggtcttgggaac
tctcagcccgtcacaagtttaagaaacgttggttcgagcaacaatatctctgttcagtca
tcaccatcccatgggtacgcaccaacgattgctaaaggccataaggagtccgtctatgct
ttggcgatgaatgatgcagggacgatgctcgtctctggtggaacagagaaggttttgcgt
gtctgggaccctagatctggttcaaaaactatgaagctgagggggcacacagataatgtc
agagtgctgcttctagactcaactggcaggttttgcttgtctgggtcctctgattctatg
ataagactttgggatctaggtcagcagcgatgtcttcatacctatgcggtgcacacagat
tctgtttgggcgcttgcatgcactccatcatttactcatgtttatagcggtggaagagac
caatcgctatacttgacagacttggcaacaagagagagcgttttgatgtgtactaaggaa
catccgattcagcaattagcgttgcaagatgatagtatatgggttgcaacaatagactcc
tctgtggagagatggcccgccgaagtacagagtcctgaaaaggtctttcaacgaggtggc
tctttcttggctgggaatttgtctttcaatagggcgagagtgtccttggaaggactaaat
ccaccccctgcctacaaggagcctttgatgactattccaggaagccacccgattgtgcag
catgagattttaaataataaaaggcaaatcttaaccaaggacgcaggtgactcagtgaaa
ctatgggatataactaagggtgttgtggtagaggactttgggaagatatcatttgaagag
aagaaagaagaactgtttgaaatggtaagcattccgtcatggtttactgtggatacacga
cttggatgcttatccttacatttggagactccacaatgcttctctgctgagatgtattca
gcagacctcaaagtttccgggcgacccgaagatgataagattaatctaggtcgtgaaaca
ctgaaaggcctgctgggtcattggatggcaaagaagaagcacaaaccaaaaccccaagct
cttacctctggagatgttctatccgtaaaggataccaaaaagaatctgaatgcatccaaa
agtgaagacagcagtgctgggaatgatccggtgtatcctccatttgagtttccttctatc
tcccctccgtccatcatcactgagggttctcaaggaggtccatggaggaagaagataact
gagtttaccggaactgaagatgagaaggacttccccttgtggtgcctggacgccgtcttg
aacaatcgtcttccacctagagaaaatacaaaattaagcttcttcctgcatccatgcgaa
ggctcaaatgtgcaggtggtcacactagggaaacttagtgcaccccggatcttaagagtt
cacaaggttaccaattacgttgtggagaagatggtccttgacagtccgttggatagttta
gctactgatggagcaagcgtttcaggaggaccacagcaactgtttgcaggaaatggactg
ctaacgcctggatcaaagccttggcagaaactcagaccttccattgagatcctatgcaat
aaccaggtcttatctccagagtggagtttggcaactgtgcggacgtttatatggaagaaa
cctgaggatctaatcctcaactacagggtggctatagctaaataa

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