Brassica napus (rape): 106388847
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Entry
106388847 CDS
T04128
Name
(RefSeq) long chain acyl-CoA synthetase 6, peroxisomal-like
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
bna
Brassica napus (rape)
Pathway
bna00061
Fatty acid biosynthesis
bna00071
Fatty acid degradation
bna01100
Metabolic pathways
bna01212
Fatty acid metabolism
bna04146
Peroxisome
Module
bna_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
106388847
00071 Fatty acid degradation
106388847
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
106388847
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
bna01004
]
106388847
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
bna04147
]
106388847
Enzymes [BR:
bna01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
106388847
Lipid biosynthesis proteins [BR:
bna01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
106388847
Exosome [BR:
bna04147
]
Exosomal proteins
Exosomal proteins of breast milk
106388847
Exosomal proteins of breast cancer cells
106388847
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Apo-VLDL-II
Motif
Other DBs
NCBI-GeneID:
106388847
NCBI-ProteinID:
NP_001302881
UniProt:
Q96338
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All DBs
Position
C3:complement(24025950..24031293)
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AA seq
677 aa
AA seq
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MDSTSAARRRINAIHSHLVTSSRSSPLLLSSNPTAGEFYLDNGYSVVLPEKLSTGKWHVY
RSARSPFKLVSRFPDHPDIATLHDNFEHAVHDFRDYKYLGTRVRVDGTVGDYKWMTYGEV
GTARTALGSGLVHHGITTGSSVGIYFINRPEWLIVDQACASYSYVSVPLYDTLGPDAVKF
IVNHANVQAIFCVAETLNSLLSGLSEMPSVRLVVVVGGLNESLPSLPPSAGVKVVSYSVL
LNQGRSNPQPFCPPKPDDVATLCYTSGTTGTPKGVVLTHANLIANVAGSSFSVKFFSSDI
YISYLPLAHIYERANQILAVYFGVAVGFYQGDNMKLLDDLAALRPTVFSSVPRLYNRIYD
GITNAVKTSGGLKERLFNAAYNAKKQALLNGKSASPIWDRLVFNKIKDRLGGRVRFMTSG
ASPLSPEVLEFLKICFGGRVSEGYGMTETSCVISGMDEGDNLTGHVGSPNPACEVKLMDV
PEMNYTSADEPHPRGEICVRGPIIFRGYYKDEVQTREVIDEDGWLHTGDIGLWLPGGRLK
IIDRKKNIFKLAQGEYIAPEKIENVYAKCRFVGQCFIYGDSFNSSLVAVVSVDPDVLKSW
AASEGIKGELRELCNNPRVKAAVLSDMDAVGRESQLRGFEFAKAVTLVLEPFTLENGLLT
PTFKIKRPQARNTSQKQ
NT seq
2034 nt
NT seq
+upstream
nt +downstream
nt
atggattctacctccgccgcacgccgccgcataaacgctatccactcccatctcgtcacg
tcttcccgctcttcccctctcctcctcagctccaatcccaccgcgggcgagttctatctc
gataatggctatagcgtcgtgcttccggagaagctgagcactggcaagtggcacgtctac
agatctgctcgatctccgttcaagctcgttagtaggttcccggatcatcctgacatcgcc
actctccatgacaactttgagcatgctgttcatgactttcgggattacaagtacttagga
actcgcgttcgtgtcgacggaactgttggagactacaaatggatgacatatggagaagtt
ggtacagcaagaactgctctaggttctggtttagttcatcatggcatcaccacgggatct
tctgttggaatttactttatcaaccgcccagagtggctcattgtcgatcaagcttgtgct
tcttattcgtatgtgtctgttcctttgtatgatactcttggtcctgatgctgtaaagttt
atcgtcaatcatgcaaatgtgcaagccatattctgtgtggctgagacgttaaactcctta
cttagcggcttgtctgagatgccaagcgtacgcctggtggtggttgttggagggttgaat
gaatctttgccttcgcttcccccatccgcaggagttaaagttgtatcatattcggtgtta
ctgaaccagggccgtagtaaccctcagccgttttgtccaccaaaacccgatgatgttgca
accttatgctatacaagcggaacaactgggaccccaaagggagtcgtattgactcatgca
aacttgattgcaaatgttgctggatccagttttagtgtgaaatttttctcttcagatatt
tacatttcatatcttccactggcacacatttacgaacgagcaaatcagatcctagcagtg
tacttcggagttgccgttggtttctaccaaggggacaatatgaaactactggatgatctg
gctgctctgagacctactgtattcagcagcgtcccccgattatacaatagaatatatgat
ggtattactaatgcagtaaaaacctcgggtgggctgaaagagaggctcttcaatgctgca
tataatgcaaagaaacaggctctcttgaatggaaaaagtgcgtctcccatatgggacagg
ttggtatttaataagataaaagacagacttggaggacgagttcgttttatgacgtctggg
gcttcacctttgtctcctgaagtgttggagtttttgaagatatgctttggaggaagggta
tcagaaggatatggaatgactgaaacatcttgtgttataagtggaatggacgagggtgat
aacctcactggacatgttggctctcctaatccagcttgtgaagtaaagcttatggatgtc
ccggaaatgaactatacatcagcggatgaaccacatcctcgtggtgagatatgtgttaga
ggtcccatcatctttagaggctattacaaggatgaagttcaaacgagagaggtgattgat
gaagatggatggcttcacactggagatataggtctttggttgccgggaggacgtctaaaa
attatcgacaggaagaagaacatcttcaaattggctcaaggggagtatatagctccagag
aaaattgaaaacgtctatgccaaatgcagatttgtgggccaatgcttcatatatggtgat
agctttaattcatcattggtggctgttgtatcggttgatccagatgtgcttaaaagctgg
gctgcttcagaaggcataaagggagaactgagagagttgtgcaataacccgagagtgaaa
gcagcagtattatcagacatggacgctgttgggagagaatctcagttgagaggctttgag
tttgcaaaagctgtaacattggtgctggagccattcacgctagaaaatggcttgttgaca
ccaacattcaagattaagagaccacaagcaaggaatacttcgcagaagcaataa
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