Brassica napus (rape): 106389089
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Entry
106389089 CDS
T04128
Name
(RefSeq) exocyst complex component SEC8-like
KO
K06111
exocyst complex component 4
Organism
bna
Brassica napus (rape)
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
bna04131
]
106389089
Membrane trafficking [BR:
bna04131
]
Exocytosis
Tethering complex
Exocyst complex
106389089
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Sec8_N
Vps54_N
EXOC6_Sec15_N
Sec8_C
TMF_TATA_bd
z-alpha
Motif
Other DBs
NCBI-GeneID:
106389089
NCBI-ProteinID:
XP_048606163
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Position
C3:complement(25337946..25346962)
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AA seq
1045 aa
AA seq
DB search
MGIFNDLPVPSDKTYLREELARIDESWAVARFDSLPHVVHILTSKDREADIHILREQSDV
VEEVVDEVVHAYHGGFNKAIQNYSQILRLFRESTEKLGDLKHDLADAKKSLGARNKQLHQ
LWYRSVTLRHIISVLDQIESISKVPSRIEKLIADKQFYAAIQVYLQSSLMLEREGLQTVG
ALQDVRSELSKLRGSLFFKILDDLHAHLYNRGEYSSIASGIYERDDEVPTTTAVAASRMG
SRPLSRRTRTLKGDSQFGVRGLTNGSHRSASIEEGSSFDGHDEEDSVEHDEASADSKFLA
HQLPPWLSDSTPDEFIEAVRKSDDPLHVKYLQTLVECLCMLGKVAAAGAIICQKLRPTIH
EIIISKIKAHMETRNLSKSGSSQSDRTGAVGLHIIKGQSEAYRLSKEKPQNGMPNSGSHL
AVSPVSPLMAPGGKAQAAAKDLLDSILDTIVKIFENHVVIGELLELKASQHDINTPKSLP
TDVNWNTDPEASQVTGGYTISLPLTVLQSECQQLICEILRATPETASADAAAQTAKLAKK
APKKDKRGAPEDGLTFTFRFTDATVSLSNQGADLIRQGWGKRASNASQEGYGSAAVLPEQ
GIYLAASIYRPVLQFTDKITSMLPKKHSQLVNDGLLTFTENFVKDHLLPTMFVDYRKGVQ
QAISSAAAFRPRAHTSTYTSTVEKGRPILQGLLAIDLLAKEVLGWAQAMPKFATDLVKYV
QTFLERTFERCRTSYMEAVLEKLSYRLIGRHDIERLMRLDAASACLPSSLGHSVSHSEAV
GSGVELDDLFLSLPSIKQDNLIRDDNKLILLASLSDSLEYVADSIERLGQAVPCAASQDS
NSRNQATSPRNLASFADEYRKLATDCLKVLRVEMQLETVFHLQEMTNREYLEDEDAEEPD
DFVISLTSQITRRDEGMAPFISGEKRNYVFGGICGTAASASTKALSDMRSINLFGVQQIC
RNTIALEQAMAAIPYIDGESVQQNLDRVRTYFELLNMPFEALLAFIAEHDQMFTPTEYSN
LLKVNVPGRDTPPDAQHRLSEILSH
NT seq
3138 nt
NT seq
+upstream
nt +downstream
nt
atgggaattttcaacgacttgcctgttccttcggataaaacttaccttagggaggagctg
gcacggatagatgagagctgggctgttgcacgttttgactctttgccacatgtggtccat
atccttacttcaaaagaccgtgaagctgacattcatatattaagggaacaaagtgatgtt
gttgaggaggttgtggatgaagttgtgcatgcttatcatggtggtttcaacaaggccatt
caaaactactctcagattttgcgtctattcagagagtccactgaaaaattaggcgacttg
aagcatgatttggcagatgcaaagaagagcttgggtgcacgcaataaacaattacaccag
ttgtggtaccgttctgtgacattgcggcacatcatctcagtgttggatcaaattgagagc
atttctaaggttccatctcgtattgagaagctcattgccgataagcagttttacgctgct
attcaagtgtatctccagtcgtctctgatgcttgagcgtgagggccttcaaacggttggt
gctcttcaagatgtcagatctgagctatctaagctgcgaggatctcttttcttcaaaatt
ctagacgatttgcatgcacatctatacaatagaggtgaatacagttcaattgcgtcaggc
atatatgaaagagatgatgaagtaccaacaacaacagctgttgcagccagtcgaatgggc
tcacgaccactttctcgtagaacacggacactgaaaggtgatagtcagtttggtgttagg
ggactcacaaatggttcacataggtcggcttctatcgaagaaggttcatcatttgatgga
catgacgaggaggactctgtagagcatgatgaagcatccgctgatagtaaatttcttgct
caccaacttccgccgtggctttctgattccactcctgacgagtttattgaagcagtaaga
aagagtgatgacccattgcatgtgaaatatctacagacccttgttgagtgtctctgtatg
cttgggaaagttgcagcggctggtgctatcatatgccaaaaacttcgacccacaatacat
gagatcataatatccaagattaaggcccatatggagactagaaatttgtcgaagtccggg
agtagtcagagtgatcgaacgggagcggtaggattgcatattatcaaagggcagtcagag
gcctacagattatcaaaagagaaacctcaaaatgggatgccaaattcaggatctcacctg
gctgtgagtcctgtttcgcctcttatggctcctggaggcaaagcgcaagctgcagcaaaa
gaccttcttgactcaattttagatactattgtcaagatatttgagaatcatgttgttatt
ggagagcttttggagttgaaggcttcacaacatgacattaacacgccaaagtcattgcct
actgatgtcaattggaacaccgatcccgaagcatcccaagttactggaggctacactatc
agtttacccttgacagtcttacagagtgaatgccaacaactcatatgtgaaattctacgc
gcaactccagaaaccgcttcagcagatgctgctgcacaaactgctaaacttgcaaagaag
gctcccaagaaagataaaaggggtgcacctgaagatgggctaacattcacctttcggttt
acagatgcaactgtatcgctttctaatcagggagctgatctcattcgtcaaggctgggga
aagagggcttcaaatgcatcacaggaaggttatggatctgcagcagttttgcctgaacag
ggaatatatctagctgcatcaatttaccggcctgtccttcagtttaccgataaaatcact
tcaatgttgcccaaaaagcattcccagcttgtgaatgatgggttgcttacattcactgag
aactttgtgaaagatcacctgttaccgacaatgtttgtggactataggaaaggcgtacaa
caagctatatcaagtgccgccgcatttagaccccgtgcacatacaagtacttacacctca
actgtagaaaagggtcgacctatcttgcaaggtcttttggcaatagatctccttgcaaaa
gaggttcttggctgggctcaagccatgcctaaatttgccactgaccttgtgaagtatgtt
caaacatttcttgagagaacattcgagagatgtcgaacctcatacatggaggctgtgcta
gagaagctcagttataggctcattgggaggcatgatattgagagattgatgcgacttgat
gcggcgagtgcttgtttgccatcttcacttgggcattctgtttctcactctgaggctgtt
ggctccggagtagaactcgatgatctattcttaagtttgccgtctatcaagcaggataat
ctaattcgtgatgacaacaaactgattttgttagcctctcttagtgactcacttgaatat
gtggcagactctattgagaggcttggccaagcagttccttgtgcggcaagtcaagatagt
aatagcaggaatcaagcaacttctcctaggaatctggcatcatttgctgatgagtacaga
aaacttgcgacggactgcctaaaggttcttcgtgttgagatgcaattggaaacagtcttt
catctgcaggaaatgacaaatcgggaatacttggaggatgaggatgccgaagagccagac
gactttgtgatttctcttacttcacagataacacgtagggacgagggaatggcgcctttc
atctctggtgagaagcgcaattacgtttttggtggcatttgtggaactgcagcaagtgcg
tccactaaggctttgtctgacatgagatcaatcaacctctttggagttcaacaaatttgt
cggaacactattgcattggaacaggccatggcagctattccatatatcgatggggaaagc
gtacaacagaacctagatcgtgtccgtacttactttgaactactaaacatgccattcgag
gcgttgcttgcattcatagcggaacatgaccaaatgtttacacccacagagtattccaat
cttctaaaggtgaatgttcctggaagagatactcctccagatgctcaacaccgcctttcg
gaaattctttctcactga
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