Brassica napus (rape): 106389150
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Entry
106389150 CDS
T04128
Name
(RefSeq) probable inactive E3 ubiquitin-protein ligase SINAT6
KO
K04506
E3 ubiquitin-protein ligase SIAH1 [EC:
2.3.2.27
]
Organism
bna
Brassica napus (rape)
Pathway
bna04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
106389150
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
bna04121
]
106389150
Enzymes [BR:
bna01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
106389150
Ubiquitin system [BR:
bna04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
SINA (Seven in absentia) proteins
106389150
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sina_TRAF
Sina_ZnF
FAIM1
Sina_RING
Motif
Other DBs
NCBI-GeneID:
106389150
NCBI-ProteinID:
XP_013684795
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Position
C3:complement(26939123..26940477)
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AA seq
250 aa
AA seq
DB search
MYVVIVHTYIHNKPTFIHISPLSLHHLPFDFMNSSEMEPRINHLQIESQVHELLDYPVCT
NQITSTIYQCSNDYTGEVNNDKEKPYNCPYSGSKCTVTGDIRWLLQHLRNDHHVEMHDGR
SFSHRYVHHNPKHLHHATWMLTLLDCYGRQFCLYFEAFHLKKTPMYIAYMQFMGDEEEAT
SFSYILEISGNGRKMTWQGVPRSIRDSHKTVRDSQDGLIITRKLAMFFSADNTNSKELKL
KISGRIWREH
NT seq
753 nt
NT seq
+upstream
nt +downstream
nt
atgtatgtggttattgtacatacatacatacataacaaacctacattcatacacatttct
cctctttcacttcatcacttgccttttgatttcatgaattctagcgaaatggaacctcga
atcaatcaccttcagattgaatctcaggtccatgagttgcttgattatccggtttgtaca
aatcagattacttctacaatctaccagtgttccaatgactacaccggagaggtcaacaat
gataaggaaaaaccgtataattgtccctactctggatccaagtgtacagtcacaggagat
attcggtggctgcttcagcatctaaggaatgatcatcatgttgaaatgcatgatgggaga
agtttcagtcatcgatatgtccatcataatcctaaacatcttcatcatgctacttggatg
ttaactcttctggattgttacggtcgacaattctgcttatactttgaagcattccacctt
aagaagacgcccatgtacatagcttacatgcagtttatgggagatgaagaggaagcaaca
agcttcagctacattttggagatcagtggcaatggcagaaagatgacatggcagggagtg
cctagaagcattcgtgacagtcacaaaaccgttcgtgacagccaagacggcttgatcatc
actcgcaagttggctatgttcttctctgccgataataccaacagcaaggaactgaagttg
aagatttcaggtcgtatatggagagaacattga
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