KEGG   Brassica napus (rape): 106389200
Entry
106389200         CDS       T04128                                 
Name
(RefSeq) polynucleotide 3'-phosphatase ZDP isoform X2
  KO
K08073  bifunctional polynucleotide phosphatase/kinase [EC:3.1.3.32 2.7.1.78]
Organism
bna  Brassica napus (rape)
Pathway
bna03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:bna00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    106389200
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:bna01009]
    106389200
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:bna03400]
    106389200
Enzymes [BR:bna01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.1  Phosphotransferases with an alcohol group as acceptor
    2.7.1.78  polynucleotide 5'-hydroxyl-kinase
     106389200
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.3  Phosphoric-monoester hydrolases
    3.1.3.32  polynucleotide 3'-phosphatase
     106389200
Protein phosphatases and associated proteins [BR:bna01009]
 HAD phosphatases
  Other HAD phosphatases
   106389200
DNA repair and recombination proteins [BR:bna03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Other BER factors
     106389200
SSDB
Motif
Pfam: PNK3P zf-PARP Hydrolase HAD_2 Hydrolase_6 Acyl_transf_1
Other DBs
NCBI-GeneID: 106389200
NCBI-ProteinID: XP_013684858
UniProt: A0A816I675
LinkDB
Position
C3:27588813..27592887
AA seq 510 aa
MVLASFVSRHSHSLPPLIVHHSNLFLRQRGRNHLRHRCVRTTSAAEKMPIVAEYAKSNRS
SCKACSKSIASKTLRLGLISKGPGGFDMTRWHHLNCFRTESESIASVDDIKGLSALEKDD
QDALVKLVEQCGEPAKEVDEKEEEIEHPGSDEISGEKIKETKGSSASSKVIAEYAKSSRS
SCKKCSKTIAAKELRLGLVTRDSRGFDMTKWHHLGCFPVESDPIDSVEDIGGFSSLQSGD
QDALKELVQQCENKTLLTEETNKRKHSQVGEMVEEDEVQTNTSQPTTRKPKMNTSESTSQ
VVAEVEISLSASDVKKKYRDASLLPKWKAFETVIFLERDDGLNDSEKIAAFDFDGCLAKT
SVKIVGADAWSLVYPSIPEKLQSLHSQGYKLVIFTNESNIDRWKNKRQAAVDSKIGRLNS
FIKRVEVPIQVFIACGVASSGGKDDLYRKPKAGMWQLMKKHFNSGIEIDMDKSFYVGDAA
GRKGDHSDADIKFAQANGLKFYTPEEYFIS
NT seq 1533 nt   +upstreamnt  +downstreamnt
atggttttagcctccttcgtctctcgccactctcactctcttcctcctttgatcgtccat
cactccaatctctttctccgtcaacgaggacgaaaccatctccgccaccgttgcgttcgg
acaacatcggcggcggagaaaatgccgatcgtagccgagtacgcgaagtcgaaccgctcc
tcctgcaaggcatgctcgaagtcaatcgcctcgaaaaccctgagattaggattgattagc
aagggacctggcggcttcgacatgaccagatggcatcatttgaattgtttccgcaccgaa
tcggagtcgattgcttccgtcgacgatatcaaaggcttatccgcgttagagaaagatgat
caagatgcgttggtgaaattggtggaacagtgtggtgagcctgctaaagaagttgatgag
aaggaggaagagattgaacatcctggttcagatgagataagtggggagaagattaaggag
acgaaaggttcttctgcttcttcaaaagttattgctgagtacgcgaaatcaagcaggtca
tcgtgcaagaagtgctctaagactattgctgcaaaggaactgagattggggctggtgacc
agagactctaggggattcgatatgacaaagtggcatcacctgggctgtttccccgttgaa
tcagatccaattgattctgtagaggacattggtgggttttcatcactgcagagtggtgat
caggatgcattaaaggagttggtccaacaatgcgagaacaagaccttgctgacggaggag
acaaacaagagaaaacattctcaggttggggagatggtggaagaagatgaagtgcaaacc
aacacgagccaaccgactactagaaaacctaagatgaacaccagtgagtcaacttctcag
gtcgtagctgaagtagaaatctctctttcagcttctgatgtgaagaaaaagtacagggat
gccagtctattaccgaagtggaaagcgtttgagactgtaatattccttgagcgggatgat
ggtcttaatgattcggagaagatagctgcatttgattttgatggatgcctagcaaaaaca
tctgtgaaaatagtaggtgcagatgcatggtcccttgtgtacccttctattcctgagaaa
ctacaaagtcttcatagtcaaggctacaagctggttattttcacgaatgagtccaacatt
gatcggtggaagaacaaaagacaagctgctgtggactcgaaaattggacgcctcaacagt
ttcatcaagcgcgtggaggtccccattcaggtgtttatagcctgtggagtcgcaagttct
ggtggtaaagatgacctttaccgcaaacccaaggctggaatgtggcaactcatgaagaaa
cactttaactctggaattgaaattgatatggataaatcgttctacgttggggatgcagcc
ggaagaaaaggcgatcacagcgacgcggatataaaatttgcacaggcaaatggattgaag
ttttacaccccagaggagtactttatctcttga

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