KEGG   Brassica napus (rape): 106389258
Entry
106389258         CDS       T04128                                 
Name
(RefSeq) sm-like protein LSM7
  KO
K12626  U6 snRNA-associated Sm-like protein LSm7
Organism
bna  Brassica napus (rape)
Pathway
bna03018  RNA degradation
bna03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:bna00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    106389258
  09123 Folding, sorting and degradation
   03018 RNA degradation
    106389258
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:bna03019]
    106389258
   03041 Spliceosome [BR:bna03041]
    106389258
Messenger RNA biogenesis [BR:bna03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     106389258
  mRNA degradation factors
   5'-3' decay
    Lsm complex
     106389258
Spliceosome [BR:bna03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   LSm proteins
    106389258
SSDB
Motif
Pfam: LSM DUF150_C Hfq
Other DBs
NCBI-GeneID: 106389258
NCBI-ProteinID: XP_013684923
LinkDB
Position
A6:complement(25735965..25737529)
AA seq 99 aa
MSGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDGALESVRDHDDPLKT
TDQTRRLGLIVCRGTAVMLVSPTDGTEEIANPFNQPEAL
NT seq 300 nt   +upstreamnt  +downstreamnt
atgtcaggaagaaaggaaacggtgttggatttggccaagttcgttgacaagggtgttcaa
gttaagctcaccggtggtagacaagtcactggaactcttaagggctacgatcagttgctc
aaccttgttcttgatggggctctagagtctgtgcgagatcatgatgatcctttgaagacc
actgaccagacaagacgcctcggtttaattgtttgccgtggaactgcagtgatgctcgtc
tcaccaactgatggaactgaagaaatcgctaaccctttcaatcaaccagaagctctctaa

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