Brassica napus (rape): 106389274
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Entry
106389274 CDS
T04128
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 14 isoform X1
KO
K11836
ubiquitin carboxyl-terminal hydrolase 5/13 [EC:
3.4.19.12
]
Organism
bna
Brassica napus (rape)
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
bna01002
]
106389274
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
bna04121
]
106389274
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
bna04147
]
106389274
Enzymes [BR:
bna01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
106389274
Peptidases and inhibitors [BR:
bna01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
106389274
Ubiquitin system [BR:
bna04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
106389274
Exosome [BR:
bna04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
106389274
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
UBA_7
zf-UBP_var
UBA
zf-UBP
UCH_1
UBA_DHX29
UBA_4
UBA_8
Motif
Other DBs
NCBI-GeneID:
106389274
NCBI-ProteinID:
XP_013684931
UniProt:
A0A078H3I4
LinkDB
All DBs
Position
C3:complement(30708747..30714258)
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AA seq
797 aa
AA seq
DB search
MELLRSNLSRVQIPEPTHRIYKHECCLSFDTPRSEGGLFVDMNSFLAFGKDYVSWNYEKT
RNPVYLHIKETPKSVPEDRPLKKPTLLAIGVDGGFDNNEPEYKESYSIVILPDFVSLPFP
SVELPEKVRIAVDTVMSAVGAEKREQVAAWTAEEKKVSEHALTLQQIKSGVVIPPSGWKC
SKCDKTENLWLNLTDGMILCGRKNWDGTGGNNHAVEHYKETNYPLAVKLGTITADLEAAD
VYSYPEDDSVLDPHLAQHLAHFGIDFSTMQKTEMTTAERELDQNTNFDWNRIQESGKELV
PVFGPGYTGLVNLGNSCYLAATMQILFSTHSFISRYFSHQSLKLAFEMAPADPTLDINMQ
LTKLGHGLLSGKYSIPVAEKDVATGDVRQEGIPPRMFKSVVAAGHAEFSSMRQQDALDFF
LHLLDKVERGNNMRPDLDPSRSFKFGVEEKILCSSGKVSYNKRDDCILSLNIPLQEATNK
DELEAFNNQKADKGLEEDNMSTDEIVRPRVPLEACLATFSSPEQIRDYYSTALKGKTTAI
KTTSLTSFPDYLVLHMRKFVMEAGWVPKKLDVYIDVPDVIDISHMRSKGLQPGEELLADD
VPEEAMESAQPVANEEIVAQLVSMGFSQLHCQKAAINTSNTGVEEAMTWLLSHMDDPDID
APISHQKSDVDQSSVDTLISFGFAEEVARKALKASGGDIEKATDWIFNNPNASLSDMDVS
SSSSALTPAESALPDGGGRYKLFGIVSHMGTSTHCGHYVAHILKEGRWVIFNDSKVGIST
NPPKDMGYLYFFQRLDN
NT seq
2394 nt
NT seq
+upstream
nt +downstream
nt
atggagctcctccgatcaaacttgtctagggttcagatccccgagcccacccaccgcatc
tacaagcacgagtgctgcctctccttcgacactccgagatccgaaggaggtttgttcgtg
gatatgaacagctttctcgcttttgggaaagactacgtttcttggaactacgagaagacg
cgaaaccctgtgtatctgcacatcaaggagactcccaagtctgttcctgaggatcggcct
ctgaagaagccgactctcctcgctataggagtggatgggggatttgacaacaatgagcct
gagtataaagagtcttatagcatagtcatacttccagattttgtttcacttccattccct
tctgttgagctaccagagaaggtgaggattgcggttgatactgtaatgagtgcagttggt
gctgagaagagagagcaagttgcggcttggacagctgaggaaaagaaagttagtgagcat
gcattgacgctgcagcagatcaagagcggcgttgttattcctccctctggttggaaatgt
tccaagtgtgataagacggagaatctgtggcttaatctcaccgacgggatgattctatgt
ggaaggaaaaactgggatgggactggtggaaacaaccatgcagttgagcattacaaggag
acaaactaccctcttgctgtcaagcttggaactatcacagctgacttggaagcagcagat
gtttattcctatccggaagatgacagtgttttggacccgcacctggctcagcatctggcc
cattttggaatcgacttctccacgatgcagaagacagaaatgacaactgctgaaagagaa
cttgatcaaaatacgaattttgattggaatcgtatacaagagagtggaaaagaattggta
ccagtttttggaccgggatataccggacttgtcaatcttgggaacagttgctacttggca
gctacgatgcagattcttttctcgactcattcgtttatttcaagatacttttcacatcag
agcttaaagttggcatttgagatggctccggctgatccaactttggacatcaatatgcaa
ttaacaaagcttggacatgggttattatctgggaagtactctattcctgtggcagagaag
gatgttgcaactggagatgttagacaagaaggaatacctcctcgcatgttcaaatcggtg
gttgctgcaggacatgcagaattctcttctatgagacaacaggatgctcttgactttttc
ctccatttgctagacaaggttgagcgtggcaacaacatgagaccagatttagacccttcg
aggagcttcaaatttggagtagaagaaaagatcctttgttcatctggaaaggtttcatat
aataagagggatgactgtattctttctttgaacattccattgcaggaggcaactaataaa
gatgaactagaagcctttaacaaccagaaagcagacaaaggactggaagaagataatatg
tcaactgatgaaattgtacgtccacgagttcctttagaagcttgtctagcaacgttttcg
tcacctgagcagattcgtgattactatagcactgctctgaaagggaagacaacagctatc
aagacaactagtttgacatctttcccagattatttggtgttgcacatgcggaagtttgtt
atggaggcaggctgggtgccaaagaaacttgatgtgtacattgatgttccggatgtaatt
gatatcagccacatgcgcagcaaagggcttcagcctggcgaggaactattggcagacgat
gttccagaagaagcgatggaatcagcacagcctgtggcaaatgaagagatagttgcacaa
cttgtctcaatgggattcagccagcttcactgccagaaagccgccataaatacttctaat
actggggtggaagaggcgatgacctggttgctttctcacatggatgatccagatatcgac
gcaccaatctcccatcagaaatctgacgttgatcaatcaagcgttgataccttgatctca
tttggttttgctgaagaggttgctcgaaaggcactcaaagcctcgggaggagacattgag
aaagcaacagattggatattcaacaaccctaatgcatctctctcggacatggacgtttcc
tcaagcagttcagcattgactccagctgaaagtgcattaccagacggaggagggagatac
aagttgtttgggatagtaagtcacatgggaacatcaacacactgtggtcactatgtggca
cacatattgaaagaaggccgttgggtgatcttcaatgacagcaaagtaggtatctcgaca
aatcctcctaaagacatgggttacctctacttctttcagcgtctggacaattga
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