Brassica napus (rape): 106389288
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Entry
106389288 CDS
T04128
Name
(RefSeq) pumilio homolog 5-like isoform X1
KO
K17943
pumilio RNA-binding family
Organism
bna
Brassica napus (rape)
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PUF
PUF_NOP9
APC_u15
VPg
Motif
Other DBs
NCBI-GeneID:
106389288
NCBI-ProteinID:
XP_013684947
UniProt:
A0A816W335
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Position
A3:complement(19048118..19052269)
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AA seq
835 aa
AA seq
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MTTTQSAMRMVEGDHHMKNWQQASRFGSHDMAVEDLAFLMKRNRLDSGSAGGDHIPSRSG
SAPPSMEGSFAALRNLLKQQEGSSSSEVLSKAIESYDSEEEIRRDPAYVAYYLSNVNLNP
RLPPPLISRENQHLLSTTASWDGMGIRSSLHSSRTALSTHREEPEDEGSLVEQQPYASLA
NMIQRPHSAEDIHAISSSIASERLHESDISSLSMDAIASEDTLASQNSTNAQNERTKNNL
SLFGASPSSMRNQEKQQHSQGRRMPPPSYQLQATFPQQMMHNLPKTATTPMYTSTSAYMT
SLSPFYNQSSGMYLPQYSYSGYPQYMSGYQSHEGTLPMPYDISPTSSGYNNNARLLPEGG
HNTPSLVDPFQWQYYQQPQADTYSPSFQSSSELHSNPLSPSYGMQSPRHMGNYFAVPPGV
RVMPQYQGSPLASPVMPSSPVSGGMMGQFGRRSETRYHQQGTSRNTGIYPGGWQGGNVDD
YKRHSFLDELKSPNARKLELSDITGRVVEFSVDQHGSRFIQQKLDHCSDEEKASVFIEVL
PQASKLMTDVFGNYVIQKFIEHGTPSQREELVKQLAGQMVSLSLQMYGCRVIQKALEVID
ADQKTELIRELDGNVMKCVRDQNGNHVIQMCIESMPADRIGFVIAAFRGQVATLSTHPYG
CRVIQRILEHCSDGEETRCVIDEILESAFALAHDQYGNYVTQHVLERGKPDERRKIIEKL
TGNVVQMSQHKYASNVVEKCLEHGDGTERELLIEEIMGKSEEDNHLLAMMKDQYANYVVQ
KVLEISKDQQREVLVQRMKIHLQSLRKYTYGKHIVARFEQLFGEESEASEGGTEG
NT seq
2508 nt
NT seq
+upstream
nt +downstream
nt
atgacgacgacgcagagtgctatgagaatggtggaaggtgatcatcatatgaagaattgg
caacaggcttctagatttggttcacatgatatggctgttgaagatttagccttccttatg
aaacgaaatagattagatagtggtagtgctggtggtgatcatatccctagtaggagtgga
agcgcgccgcctagcatggaaggttcatttgcagctcttaggaacctattgaaacaacag
gaaggtagtagtagctctgaagtgctgagtaaggctattgagagttatgactctgaagaa
gagatacgtagggatcctgcttatgtagcttactatttgtctaacgtcaacttgaatcca
agactccctcctcccttaatctcacgggagaatcagcacttgttaagtacaacagcctct
tgggatggtatggggataagatcttccttgcattcttctagaactgccctttcaacgcat
agagaggagcctgaggatgagggctcactggttgaacaacagccttatgcttctttggct
aatatgattcagcggcctcactcggcagaagacatccatgccatttcctctagtatagct
tcagaaagattacatgagtctgatattagttctctctccatggatgctattgctagtgaa
gatactttagcctcacaaaattctactaatgcacagaatgagagaaccaagaataatcta
tctctctttggtgcttctccatcctccatgaggaaccaagagaaacaacaacactctcaa
ggaaggagaatgccacctccatcatatcagcttcaagctacttttccacaacaaatgatg
cataacttaccaaagactgcaactactcctatgtatacatcaacatcagcatacatgact
tctctgagcccattttacaatcagtcctcgggtatgtacctcccgcagtatagttacagc
ggttaccctcagtatatgagtggataccaatctcatgaagggactcttcccatgccatat
gacatctcaccaacttcttcaggatacaacaacaacgctaggcttctccctgaaggagga
cataacactccttctcttgtggatccgtttcagtggcaatactaccaacagcctcaagca
gacacgtattctccttccttccagagcagttctgaacttcacagcaatccattgagtcca
agttatggaatgcaaagtccgcggcacatggggaactactttgctgttccccctggtgta
agagttatgccgcagtatcaaggatcacctcttgctagtccagtgatgccatcctcaccg
gttagtggtgggatgatgggacaatttggaagaagaagtgaaacaaggtatcatcaacaa
ggaacgagtaggaacacagggatctaccctggtggatggcaaggaggcaacgttgatgat
tataagagacattcttttcttgatgaactcaagtctccaaatgctcgtaaactcgagctg
tctgatatcacagggcgtgttgttgaattcagcgtggatcagcatggcagccggtttatt
caacagaagttagatcactgctctgatgaggagaaggcatctgtcttcattgaggttctt
ccacaagcttcaaaactgatgactgatgtctttggaaactatgttatccaaaagttcata
gaacatggaactccatcccagagggaagaacttgtgaagcaactcgctggtcagatggtt
tctctaagcttgcaaatgtatggatgccgtgtgatacaaaaggcccttgaagtgatagat
gctgaccaaaaaacagaactgatacgtgagctagatgggaatgtgatgaagtgtgttaga
gaccaaaacggaaaccatgttatccaaatgtgtatagagagtatgcctgcggataggatt
ggattcgttattgcagctttccgcggtcaagttgccactctttctactcatccttacgga
tgcagagtcattcagagaattttagagcattgctcagatggtgaggagactcgttgtgta
atcgatgaaatcttggaatctgcctttgctcttgctcatgatcagtatgggaactatgtc
acgcagcatgtcttagagagagggaagcctgatgagaggagaaagatcattgagaagctg
acagggaacgttgttcagatgagtcagcacaagtacgcgtccaacgttgtggagaagtgt
ttggaacatggtgatggtaccgagagagagttgctgattgaggagataatgggaaaatca
gaggaagacaatcacttgctggcgatgatgaaagatcagtacgcaaattacgtggtccag
aaagtcttggagatcagtaaagatcagcaaagggaggttctggtgcagaggatgaagatc
catctacagagtttgaggaagtacacatatgggaaacacatagtagctagattcgaacaa
ctgtttggtgaagagagtgaagcatcagaaggaggaacagaaggttag
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