Brassica napus (rape): 106389395
Help
Entry
106389395 CDS
T04128
Name
(RefSeq) phospholipase D gamma 1-like isoform X1
KO
K01115
phospholipase D1/2 [EC:
3.1.4.4
]
Organism
bna
Brassica napus (rape)
Pathway
bna00564
Glycerophospholipid metabolism
bna00565
Ether lipid metabolism
bna01100
Metabolic pathways
bna01110
Biosynthesis of secondary metabolites
bna04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09100 Metabolism
09103 Lipid metabolism
00564 Glycerophospholipid metabolism
106389395
00565 Ether lipid metabolism
106389395
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
106389395
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
bna04131
]
106389395
Enzymes [BR:
bna01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.4 phospholipase D
106389395
Membrane trafficking [BR:
bna04131
]
Exocytosis
Calcium ion-dependent exocytosis
Phospholipases
106389395
Endosome - Golgi transport
Others
Others
106389395
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
C2
PLDc
PLDc_2
DUF6835
Motif
Other DBs
NCBI-GeneID:
106389395
NCBI-ProteinID:
XP_048632006
LinkDB
All DBs
Position
A3:complement(13397939..13406919)
Genome browser
AA seq
811 aa
AA seq
DB search
MSMEGSSNASLRVVLLHGNLDIWVKEAKNLPNMDRFRRYKKNSTSDPYVTVSIADAKIGT
TFVIDNDENPVWMQHFYVPVAHHATVVKFVVKDNDRFGSRSIGDVRIPTEELCSGNRMEG
LFPILNTSGKPCKKGAVLSLAIQYTPVEMMKIYQMGVGNECEGVPGTYFPLRKGGRVTLY
QDAHVEDGTLPRVDLDGGMQYIHGKCWEDMADAIRQAKNLIYITGWSVYHPVRLVRRNND
PTDGVLGDLLKEKSQEGVRVLLLVWDDPFSSSFMGHRTRGIMKTSDEEIRHFFKNSSVQV
IICPRSGGKGHHSFVKKTEVGTIYTHHQKTLIVDAEAAQGRRKIIAFVGGLDMCKGRFDT
PNHPLFRTLKTLHKDDFHNPNFATSVDDGPRQPWHDLHSKIDGPAAYDVLANFGQRWLKA
SEKRHRISIHRSSSEDALLKIDRISNIMGLSEASSVSDNDPESWHVQVFRSLDSTSVKEF
PKNSKEASGENLLCGKNILVDMSIHTAYVKAIRSAQHFIYIENQYFLGSSFNWDSHNDVG
ANNLIPMEIALKIASKIRAREKFAAYIVIPMWPEGDPTSKGMQSILYWQYNTMQMMYQTI
YKALVEAELDVQYEPQDYLNFFCLGTREVADGNVNNNAKENPTQVQALKSGRFMIYVHSK
GMVVDDEFVLIGSANINQRSLEGTRDTEIAMGGYQPQHSWAKKGSRPCGQVIKFRLHGLR
TLVATTIYYEISRIMRSRLYFLVVIRKARIHVTQSPKYKSFFPGYVSSKTWLRNSLFLAD
LWIQNVFVGGASRVSREKFRRAREHGMRETS
NT seq
2436 nt
NT seq
+upstream
nt +downstream
nt
atgtcaatggaagggtcaagtaacgcttctttgagggtagtgttgttacatggtaactta
gacatttgggtgaaggaagctaaaaatcttcctaacatggatcgtttccggaggtacaag
aagaacagtacaagtgatccttacgtgactgtctctatcgcagatgcaaagattggcaca
acttttgtgatcgacaacgatgagaatcctgtgtggatgcagcatttctatgtaccggtg
gcccaccatgctacggtggttaagtttgtggtgaaagacaatgaccgttttggatcaagg
tccataggagatgttagaatcccaaccgaagagttgtgttcagggaataggatggaaggg
ttgtttccgatactgaacactagtgggaagccatgtaaaaagggtgctgtgctgagtttg
gctattcaatacactccagtggaaatgatgaaaatttaccaaatgggtgttggtaatgag
tgcgaaggagttcccggtacgtacttccctttgaggaaaggcggtagagttactttgtat
caagatgctcatgttgaagacgggacacttccgagagtggatctcgatggtggaatgcag
tatatacatggaaagtgctgggaggatatggctgatgcgattagacaggcaaagaacttg
atttatatcacaggatggtcagtttaccatccggttaggctggttcgtcgcaataatgat
ccgactgatggtgtattaggggatttgcttaaagaaaaatctcaagaaggtgttagagtg
ttgctattggtgtgggatgatccattttcaagtagctttatggggcacagaacacgcgga
ataatgaagacaagcgatgaggagattcgccattttttcaagaactcgtccgtgcaagtt
attatttgtcctagatctggtgggaaaggtcaccacagcttcgttaaaaaaactgaagtt
ggaactatctacacacatcatcaaaaaactttgattgtagatgctgaggcagctcagggc
cgaagaaagatcatagcgtttgttggagggctagacatgtgcaaaggacgttttgatact
cctaaccatcctctctttaggacattgaagacgctccataaagatgacttccataaccca
aactttgcgacatctgtggatgatggaccaagacaaccgtggcatgatctgcacagcaag
attgatggtccagcagcgtatgacgtgcttgctaattttggacaacgttggctaaaggct
tcagagaaaaggcacaggatttcgatacacagatcgtcttctgaggatgctttgcttaag
attgacagaatttcaaatatcatgggactatcagaagcctcttctgttagtgataatgat
ccagagtcttggcatgtccaggtttttcgttcccttgattcaacctccgtcaaagagttt
ccaaagaactcaaaggaagctagtggagaaaatcttttatgtgggaagaatatactcgta
gacatgagcatacacacggcttatgttaaggccataagatctgctcagcatttcatctac
atcgagaaccaatattttttgggatcatcattcaactgggattcacataacgacgttggt
gctaataatctgatccctatggaaatcgcacttaagattgctagtaagattagagctagg
gagaagtttgctgcttatattgtcattccaatgtggccagaaggtgatccaacgagtaag
ggtatgcagagcattttatactggcagtataataccatgcaaatgatgtatcaaactatc
tacaaggcacttgtggaagctgaacttgatgttcagtatgagccacaagactatttgaac
ttcttctgtcttggaaccagagaggttgctgatggaaacgttaacaacaacgcaaaggaa
aatcccacacaggtgcaagctttgaagagtggaagattcatgatatatgtgcattccaaa
ggtatggtagtggacgatgagtttgtcttaattggttcagcgaatatcaaccagagatcc
ttggaaggaactagagacactgaaatcgccatgggagggtatcaaccacagcattcgtgg
gctaagaaaggttctcgtccttgtggtcaggtaataaaatttcggcttcacgggcttaga
actttagtagccaccacaatatattatgaaatctcgagaattatgagatctagattatat
tttcttgtagttattaggaaagctagaattcacgtaacacagtccccaaaatacaaatct
ttcttcccaggttatgtgtcctctaaaacatggttgcgtaattccctatttcttgcagat
ctttggatacagaatgtctttgtgggcggagcatctagggtttctagagaaaagtttcga
agagccagagaacatggaatgcgtgagacgagttag
DBGET
integrated database retrieval system
