Brassica napus (rape): 106389480
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Entry
106389480 CDS
T04128
Name
(RefSeq) transformation/transcription domain-associated protein-like
KO
K08874
transformation/transcription domain-associated protein
Organism
bna
Brassica napus (rape)
Pathway
bna03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
106389480
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
bna01001
]
106389480
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bna03021
]
106389480
03036 Chromosome and associated proteins [BR:
bna03036
]
106389480
Protein kinases [BR:
bna01001
]
Serine/threonine kinases: Other
PIKK family [OT]
106389480
Transcription machinery [BR:
bna03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
106389480
Chromosome and associated proteins [BR:
bna03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
106389480
STAGA complex
106389480
TFTC complex
106389480
TIP60 complex
106389480
SAGA complex
106389480
SLIK complex
106389480
NuA4 complex
106389480
Chromatin remodeling factors
ASTRA complex
106389480
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tra1_ring
FAT
Tra1_central
PI3_PI4_kinase
FATC
Pox_J1
Motif
Other DBs
NCBI-GeneID:
106389480
NCBI-ProteinID:
XP_048609219
LinkDB
All DBs
Position
C3:complement(36920061..36935323)
Genome browser
AA seq
3170 aa
AA seq
DB search
MQLLRTVFRGLAGCKYELLLRDLIPMLLPCLNMLLTMLEGPAGEDMKDLLLELCLALPAR
LSSLLPYLPRLMKPLVFCLRGSDELVSLGLRTLEFWVDSLNPDFLEPSMANVMSEVILAL
WSHLRPVPYPWGGKALQILGKLGGRNRRFLKEPLTLECKDNPEHGLRLVLTFEPSTPFLV
PLDKFINLAVVAVIQKNQGIDIYYRKQALKFLHVCLLSQLNLPGCVTDVGQTSRQLSTLL
RSSVDSSLHRSESGEMKADLGVKTKTQLMAEKSIFKTLLVTILAASSDLDLSDSDDDFVV
NICRHFAIILHIDYTSSNASSSTGSLGGSVISASSRSKGNRSSNLKQLDPLIFLDALVDV
LADENRLHAKAALNALNVFSETLLFLARVKHADVLMARGGNNASMIVSSPSTNPVYSPHP
SVRIPVFEQLLPRLLHGCYGAHGKHRWEGYGVRCIGGEVNVETLCIFQVKIVRGLVYVLK
RLPVYASKEQEETSQVLMQILRVVNNVDEANSEARRKSFQDVVEYLATELFNPNASIPVR
KNVQNCLALLASRTGSEVTELLEPLYQLLLQPLIMRPLRSKTVDQQVGTVSALNFCLALR
PPLLKVTPELVNFLQEALQIAEADETVWAVKLMNPKVLTSLNRLRTACIELLCTTMAWTD
FRTQTHNELRAKIISMFFKSLTCRAPEIVAVAKEGLRQVINQQRMPKELLQSSLRPILVN
LAHTKNLSMPLLQGLARLLELLSNWFNVTLGGKLLEHLKKWLEPEKLAQSQKSWKAGEEP
KIAAAIIELFHLLPHAASKFLDELVTLTIDLEAALPPGQVYSEINSPYRLPLTKFLNRYA
SLAVDYFLSRLSEPKYFRRFMYIIRSDAGQPLREELAKSPQKILSYAFPEILPKLDATMS
MAASTPPATSCGDENIVAVKSESSSTAPTKANVASDAYFQGLYLIKTMVKLIPSWLQSNR
SVFDTLVLLWKSPSRISRLQNEQELNLVQVKESKWLVKCFLNYLRHEKSEVNVLFDILSI
FLFHSRIDYTFLKEFYIIEVAEGYPPNMKRALLLHFLDLFYSKQLGHDHLVQAMQMLILP
MLSYAFQNGQTWEVIDPDIVKTIVERLLDPPEEVSAEYDEPLRIELLQLATLLLKYLQSD
LVHHRKELIKFGWNHLKREDSASKQWAFVNVCHFLDAYQAPEKIILQVFVALLRTCQPEN
KMLVKQALDILMPALPKRLPLGDSRMPIWIRYTKKILVEEGHSIPNLIHIFLLVVRHSDL
FYSCRAQFVPQMVNSLSRLGLPYNTTAENRRLAIELAGLVVSWERQRQNEMKMVADTDGT
SQATDELHTSSGADPKRSTDGSATSEDPSKRVKIEPGLQSICVMSPGGASSIPNVETPGS
ATQPDEEFKPNAAMEEMIINFLIRVTLVIEPKDRETNTMYNQALDLLSQALEVWPNANVK
FNYLEKLLSSMPPSQSSDPSTALAQGLDVMNKVLEKQPHLFIRNNINQISQILEPCFKTK
MLDAGKSLCSVLKMVFTAFPLDAANTPPDIKLLYQKVNELINKHVSAVTAPQASVEDNSF
GSISFVLLVIKTLAKVHKNFVDSYVVVRILQRLARDLGSAVGSYPRQGPRADSDSAATSS
RQSADVGSVICNIKSVVELIDETVMLIPDCKRSVTQILNTLLSEKGIDASVLLCILDMIK
RWVEDDVSKTGASGMSGSFLTQKDIVAFLNKLSYLDKQQFSSDALEEWDQKYLQLLYGLC
ADSTKYPLALRQEVSLKVERHFMLGLRARDPEMRRKFFLLYHESLGKNLFSRLQYIIQIQ
DWEALSDVFWLKQGLDLLLAILVEDKPISLAPNSARVPALLPSDNPGLQHQPLATLEGPE
EVASMFDNIVMKHAQFLSATSKLQVADVVIPLRELAHTDANVAYHLWVLVFPIVWVTLLK
EEQVALAKPMISLLSKDYHKKQQGHRPNVVQALLEGLQLSHPQPRMPSELIKYIGKTYNA
WHLALALLESHVMLFMNDSKCAESLAELYRLLNEEDMRYGLWKKRSITAETRAGLSLVQH
GFWQRAQSLFYQAMVKATQGTYNNTVPKAEMCMWEEQWLHCAAQLGQWDALVDFGKSIEN
YEILLDSLWKLPDWAYLKDHVIPKAQVEETPKLRLVQAYFALHDRNSGGVGDAENIVGKG
VDLALEQWWQLPEMSVHARVPLLQQFQQLVEVQESARIHVDIANGNKVSGNAAVGAPGNR
YADLKDILETWRLRTPNEWDSMPVWYDMLQWRNEMYNVVIEAFKDFATSNSPLHHLGFRD
KAWNVNKLARIARKQELYDVCVQILEKMYGHSTMEVQEAFVKIREQAKAYLEMKGERASG
LNLINSTNLEYFPDKIKAEIFRLKGDFHLKLNDTEGANIAYSNAITLFKNLPKGWISWGN
YCDMAYQETQDEIWLEYAVSCFLQGIRFGVSNSRSHIARVLYLLSFDTANESVGRVFDKH
LEQVPHWVWLSWIPQLLLSLQRTEAPHCKLVLLKIAAVFPQALYYWLRTYLLERRDAVNK
SELGRLVLAQRMQQNASGVAGHGGGNLPSETHQGAQVGGASGTHDSGNPHGQESERSTAE
NNAHPGNDQSMHQSSSTINENTARQNGASLAMSAAGAFDAAKDIMEALRSKHNNLASELE
VLLTEIGSRFVTLPEERLLAVVNALLHRCYKYPTATTAEVPQPLKKELSGVCRACFSADA
VTKHVEFVKEYKQDFERHLDPESTTTFPATLAELTTRLKKWKNILQSNVEDRFPAVLRLE
DESRVLRDFNVVDVEIPGQYFADQEVAPDHTVKLDRVGADVPIVRRHGSSFRRLTLIGSD
GSQKHFIVQTSLTPNARSDERILQLFRVINHMFDKHKESRRRHIGIHTPIIIPVWSQVRM
VEDDVMYNTFLEVYENHCARNDREADLPISHFKEQLNQAISGQVSAEAIGDLRLQAYSDI
TKTLVNDSIFSQYMYKTLMSGSHMWAFKKQFAVQLAVSSFMSFMLQIGGRSPNKVLFAKN
TGKMFQTDFHPAYDANGMIEFNEPVPFRLTRNMQAFFSQFGVEGLLMSSICSAAQAVISS
KQNDHLRYQLAMFFRDELLSWFGRRPLGMPIPPVGGIATLNSAELKDKVNSNVKDVIGRI
RGIAPQYFSEEDENIVEPPQSVQRGVNELVEAALSPRNLCMMDPTWHPWF
NT seq
9513 nt
NT seq
+upstream
nt +downstream
nt
atgcaattgctccgtactgtattcagaggtcttgctggatgtaaatatgagctgcttctg
agagatttgattccaatgctgctaccttgtcttaatatgcttctgacaatgctcgagggt
ccagctggggaggacatgaaagatcttttgctagagctttgtttggcgcttcctgcacgc
ttaagctccttattgccttaccttccccgtctcatgaagcctcttgtattctgtttgaga
ggaagcgatgaacttgtgagcttggggttacgcacccttgaattctgggtggatagtctg
aatcccgattttctggaacctagcatggccaatgtgatgtctgaagtgatcttagcatta
tggtcccatttaaggcctgtgccatatccttggggtggaaaagctttacaaatccttgga
aagttgggtggtcgcaacagaagattcttgaaagagccacttacacttgaatgcaaagat
aacccagagcatggtctccgcttagttcttacatttgagccatccacgccttttctggta
ccgttagataaattcattaatcttgctgtagtagcggttattcagaagaaccaaggcata
gacatctactacagaaagcaagctctaaaattcctccatgtatgcctactgtctcaactt
aatttgcctggctgtgtcactgatgtgggtcaaacgtccaggcaattatcaactctgtta
cgttcctctgttgattcatctttgcacaggagtgaatcaggggaaatgaaggctgactta
ggagtaaaaacgaagacccagttaatggctgagaagtcaatcttcaagacactgctggtc
accatacttgctgcgagttccgatttggatctcagtgactccgatgacgacttcgttgta
aacatttgccgccattttgcgattatcttgcatattgactacacctcctcaaatgcatca
agtagcactggttcacttgggggttcagtgatttcggcgagttccaggtccaagggtaat
cgatcatctaacttaaagcagttagatcctttgatatttttagacgcgctggtggatgtg
cttgccgatgaaaacaggcttcacgccaaagctgctctgaatgcgttaaatgtgttttct
gaaacacttttgttccttgctcgtgtcaaacatgctgatgtgctgatggctaggggtggt
aacaatgcttccatgattgtctcgagcccttctacaaatccagtatattcaccccatcca
agtgtgcgaataccagtgtttgaacaacttttgccccgacttttgcatggctgttatgga
gcacatggcaagcacagatgggagggttatggggttaggtgcattggtggggaagtgaat
gttgagacattatgtattttccaagtaaagattgtgcgtggtctggtttatgttctaaag
aggcttccggtttatgctagcaaagagcaagaagagacaagtcaggttcttatgcagatt
cttagagtggttaataatgttgacgaagcgaacagtgaagcacgtaggaaaagctttcaa
gatgtggtagaatatcttgctacagagctgttcaatcctaacgcatcaatccctgtgaga
aaaaatgtacagaattgccttgcacttttggctagccgaactggaagtgaggtaactgag
ttgcttgagcctttgtaccaactgctgctgcagccacttataatgcgcccactccgatca
aagacagttgatcaacaggttggaacagtttcagctctgaatttttgcttggctctgagg
cctccccttctgaaagtgactccagagttggttaactttctgcaagaagcattacaaata
gctgaggctgatgaaactgtctgggctgtgaagttgatgaatcctaaagtccttacatca
ttgaacaggcttcgaacagcttgtatcgagcttctgtgcacaactatggcttggactgat
ttccgaacgcaaactcacaatgaactgcgtgccaaaataatttccatgtttttcaagtct
ctaacatgtagagcaccagaaatcgtggcggttgctaaggagggtttaagacaggttatt
aatcaacaaagaatgcccaaggagcttcttcagagtagcctcaggccaatactagttaat
ttggcgcacacaaaaaatctcagtatgcctttactgcaaggtctggcacgcctacttgaa
cttctgtcaaattggtttaatgtgacattaggaggaaagttgctggagcacctgaagaaa
tggctggagccggagaaacttgcccaatcccaaaaatcatggaaagctggagaagagcca
aaaatagcagccgctatcattgagctcttccacttacttccacatgctgcttcgaaattt
ctagatgaacttgtaaccttaacaattgacttagaagcagctcttcctcctgggcaagtg
tacagtgagattaatagcccataccgtctaccgcttactaagttcttgaaccgatatgcg
agtctcgctgttgattattttctttctagattaagtgagccaaaatatttccgaaggttt
atgtatataatccgatcagatgcgggtcaaccgttaagagaagaactagcaaagtctcct
cagaagatactttcatatgcctttccagaaattttgccgaaacttgatgctacaatgagc
atggcagcttcaactcctccagctacatcatgtggagatgaaaatattgtcgctgttaaa
tcagagagttctagcacggcaccaacaaaggctaatgtagcatcggatgcatattttcag
gggctctacctcatcaaaacaatggtgaaactgatacccagttggctgcagagtaaccgc
agtgtttttgataccttagttctcctttggaaatcaccttcaaggatatctcgcttgcag
aatgagcaagagctgaacttagttcaggtgaaagagagcaaatggcttgtgaagtgcttc
ttgaattacctacggcatgaaaaatctgaagtgaatgttctattcgatattctctcgatt
ttcttgttccatagccgcattgactacacctttttgaaggaattctacattattgaggtt
gcagaaggttatccgcccaacatgaaaagagcacttctcctacattttcttgaccttttc
tactccaaacaactcggccatgatcatttagtccaggcaatgcaaatgcttattcttcca
atgctttcttatgctttccaaaacggccaaacttgggaggttattgaccctgatatcgtc
aaaaccattgtggagaggcttcttgatccacccgaagaggtttcggctgaatatgatgaa
cctttgaggatcgaacttttgcaattagcaactttgcttctaaaatatcttcagagtgac
ttggttcatcatagaaaagagctcattaagtttggatggaatcatctcaaacgggaagat
agtgccagtaagcagtgggcatttgttaatgtttgccacttcttggatgcttaccaggct
cccgagaaaattattctccaggtttttgttgcgcttctaaggacatgtcagccagagaat
aagatgctagttaagcaagccctggatattctaatgccagctttgcctaaaaggctgcct
cttggagattcacgcatgccaatttggataagatacaccaaaaaaatattggtggaggaa
ggtcattcaattccaaacttgatccacatcttcctacttgttgttcggcattcagatctc
ttttacagctgtagagcacagtttgtccctcagatggtgaattcgttgagtcggctaggt
ttgccatataatactactgcagagaataggcggctggccattgaacttgctggattggtt
gttagctgggaaaggcaaagacagaatgaaatgaaaatggtcgctgatactgatggaacc
agtcaggctactgatgaattgcatacttcatctggtgctgatcctaaacgttcaacagat
ggatctgccacatcagaagatccaagtaaacgagttaaaatcgaacctggtctccaatca
atctgtgtcatgtcacctggtggtgcatcatcaatccccaacgtagaaactcctggatct
gctacccagcctgacgaggaattcaagccaaatgctgccatggaagaaatgattattaat
tttctcataagagtaacgttggtaattgagcctaaggacagggaaaccaacactatgtac
aaccaagcattagatttgctttcacaagctttggaggtttggccaaatgctaacgtcaag
ttcaactatttagaaaaattgttgagcagtatgccaccttctcagtcatcagatccgtca
acagcacttgctcagggtttggatgtcatgaacaaagttctggaaaagcagccacatctt
tttattaggaacaacatcaaccagatttcgcagattcttgagccttgtttcaaaaccaag
atgctcgatgctggtaaatcgttatgctccgtgttgaagatggtcttcaccgcattccca
ctggatgcagctaatacacctcctgacataaagctattgtaccagaaagtcaatgagctg
atcaacaaacatgtgagtgctgttactgctccacaagcttcagtagaagataactccttt
ggttcaattagctttgtactccttgtcatcaaaacgttggccaaagtacacaaaaacttt
gttgattcatatgttgtggtgcgtatccttcaacgccttgcgcgggacctgggatcagca
gtgggttcttatcctagacaaggtccgcgagcagattcagattctgcagcaacttcttct
cgtcaaagtgctgatgttggatcagtcatatgtaatataaagtcggtcgtggaacttatt
gatgaaacggtcatgcttatacctgattgcaaaagatctgttactcaaattctgaacacc
ttgctttccgaaaagggtattgatgctagtgtgcttctctgcatattagacatgatcaaa
aggtgggttgaggatgatgtcagcaaaacaggtgcatctggaatgtctggttctttcctt
acccaaaaagatatagttgcttttttgaataagctttcatatcttgataagcaacagttc
tcatctgatgctttggaagagtgggatcagaagtatcttcagctgttatatggactttgt
gctgattcaacaaagtaccctctcgccctacgacaagaggtctctctgaaagttgagaga
cattttatgcttggtttgcgggcaagggatcctgagatgagaaggaagttcttcttgtta
tatcacgagtctcttgggaaaaatttgttctcacggttgcagtacattattcaaatccag
gattgggaagctttaagtgatgttttttggctcaaacaaggtcttgatctccttctagct
atcttagtcgaggacaagccaattagtctggcgccaaattctgccagggtacctgcgctt
ttgccttctgataatcctggattacaacaccaacctcttgctaccttagagggtcctgaa
gaagttgcttcaatgtttgacaacattgttatgaagcatgcccaatttctgagcgcaacc
agcaaacttcaggtggctgatgttgtcatccctttaagggagctggcacacactgatgcc
aatgttgcatatcatctatgggttttggtgtttccaattgtatgggtaactctgcttaag
gaagaacaggtagctttggctaaacctatgatttctctcctgtcaaaggactaccataaa
aagcaacaaggacaccggcctaatgttgtgcaagcacttctggaagggcttcagttgagc
caccctcaacctaggatgcctagtgagcttatcaaatatattggaaaaacgtacaatgca
tggcatctcgcattggctttgctagagagccatgtgatgttgttcatgaatgactcaaaa
tgcgctgagtctcttgctgagctttatcgtttgttaaatgaagaagatatgagatatggg
ctgtggaagaagaggtccatcactgctgaaacaagagctggactctcattagttcagcat
ggtttttggcaacgtgctcagagcctcttttatcaggcaatggttaaggcaacccaaggc
acttataataacacagtccctaaagctgaaatgtgtatgtgggaggagcagtggcttcac
tgtgccgctcagcttggtcaatgggatgccctggtagactttggaaaaagcattgagaat
tatgaaatcttgcttgatagtctttggaaactaccagattgggcatatttgaaggaccat
gtgataccgaaggcacaagtggaagagactccaaagcttcgcttggttcaagcttatttt
gcccttcatgacagaaattcaggtggtgtcggagatgctgagaacatagttggaaaaggc
gttgatcttgccttggaacagtggtggcagttgcctgaaatgtctgtacatgctagagtg
ccattactacaacagttccaacaactagttgaggttcaagagtctgcaagaatccatgtt
gacatagcaaatgggaacaaagtttcaggaaacgctgctgttggtgcaccgggaaatcgt
tatgcagatctaaaggatattctcgagacttggaggctgaggactccaaatgaatgggac
agtatgcctgtttggtatgatatgctgcagtggaggaatgaaatgtataatgtagttatt
gaagcgtttaaggactttgctacctcaaattctccacttcatcaccttggattccgggac
aaagcatggaacgtcaataagcttgccaggatagctcggaaacaagagctgtatgatgtt
tgtgtacagatacttgaaaaaatgtatggacactcgacaatggaagtacaggaagccttt
gttaaaattagagagcaggcaaaagcatatctggaaatgaagggagagcgtgctagtggt
cttaatctgatcaatagcacaaatttagagtattttccagataagatcaaagcagagatc
tttcgtctgaagggggattttcatctgaaactaaatgacacggaaggtgctaatatcgca
tattccaatgcaatcaccctgttcaagaatttacctaaaggatggataagctggggaaac
tattgtgacatggcctaccaagaaacacaagatgaaatctggcttgaatatgcagtcagt
tgctttcttcagggtataagatttggagtttccaattccagaagtcatatagcgcgtgtt
ctttatcttcttagtttcgatacagccaatgagtctgttggcagagtgtttgataaacac
ttagaacaagttcctcactgggtgtggctgtcttggatcccacagctgttgctttcctta
caaagaaccgaagcaccccattgcaaattggtcttattgaaaattgctgcagtcttccca
caagctctctattattggttgcgcacatacttactggaacgacgtgatgcagtaaataag
tcggagcttggtagattggttttggctcaaagaatgcagcaaaatgcttctggtgtagcg
ggtcatggtggaggcaatttaccatcagaaactcatcaaggcgctcaagttggaggagcc
agtggaacccatgacagcggtaacccacatgggcaagaaagtgaacgctccaccgcagaa
aataatgcccatcccgggaatgaccaatctatgcaccaaagcagctctactatcaatgaa
aacacagctaggcagaatggtgcatccttggcaatgtctgctgcaggtgcttttgacgct
gccaaggatatcatggaagctcttaggagtaaacataacaacttagccagtgaactcgag
gttcttctcacggaaataggttcgagatttgttacattaccagaagaaagattactggct
gttgtgaatgctctgttgcatcgttgttacaagtatccaactgctacaactgctgaggtt
ccccaacctctcaaaaaagaactgtcgggtgtctgcagagcttgtttctcggcagatgct
gtgacaaagcatgtcgagtttgtgaaagaatacaaacaggattttgagcgtcaccttgat
ccagaaagcacaactacattcccggccacacttgctgagctaacgacgcgactgaaaaaa
tggaaaaacattcttcagagcaacgttgaagacaggtttccggctgtgttgagactggaa
gatgaaagcagagtattgcgtgatttcaatgttgttgacgtggagataccagggcagtac
tttgcagatcaggaagtagcacctgatcatacagtaaagctggatagggttggagcagat
gtacctattgttcgaaggcatggaagcagcttcaggcggttgactcttattggctcagat
ggctcgcaaaagcattttatagtccagacatcattgacgcctaatgccagaagtgatgaa
cgcatcttgcagcttttccgtgtgattaaccacatgtttgataagcataaggaatcaaga
agacgacacattggaatccacactccaatcatcattcctgtctggtctcaggtacggatg
gttgaggatgatgtcatgtacaatactttcctcgaggtgtatgagaatcactgtgcacgg
aatgaccgagaggcagatcttcctatcagccacttcaaggagcaactaaatcaagcgata
tcagggcaagtctcagcagaggcgataggagatcttcgcttgcaggcttatagtgacatc
acaaaaacattggtcaatgacagtatattctctcagtacatgtacaaaacattgatgagc
ggaagccatatgtgggcattcaagaagcagtttgcagtccagctagctgtctccagtttc
atgtccttcatgctacaaattggtgggaggtcccctaacaaagtcttgtttgcgaaaaac
accgggaagatgttccagacagattttcaccctgcctatgacgccaatgggatgatcgag
tttaacgagcccgtgcctttccgcctcacaaggaacatgcaagcgttcttctctcagttt
ggggtcgaaggtcttctcatgtcatccatatgttcagcagctcaagcagttatctcctcc
aagcaaaacgaccatcttaggtatcaactggctatgttcttccgtgatgaattgctgtca
tggtttggaagaagacctcttggcatgccgattcctcctgttggagggattgctacattg
aactcagccgagctcaaggacaaagttaactccaacgtgaaagatgtcattggccggatc
agaggaatagccccacagtacttttctgaagaggatgagaacattgtggagccgccacag
tcggtgcaaagaggagtgaacgagttggtggaggcagccttgtcgcctcgcaacttatgt
atgatggatccaacatggcatccttggttctaa
DBGET
integrated database retrieval system
