Brassica napus (rape): 106389563
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Entry
106389563 CDS
T04128
Name
(RefSeq) protein RDM16 isoform X2
KO
K12843
U4/U6 small nuclear ribonucleoprotein PRP3
Organism
bna
Brassica napus (rape)
Pathway
bna03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
106389563
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
bna03041
]
106389563
Spliceosome [BR:
bna03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
106389563
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
PRP3
Prp3_C
Motif
Other DBs
NCBI-GeneID:
106389563
NCBI-ProteinID:
XP_022555640
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Position
C3:56510857..56514806
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AA seq
772 aa
AA seq
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MANERYSRSNWDDRDSSVDRSPEREGRHRNQVRDRDGDSKRRDSDHYRPSRRDDREEERD
RGKDRARDREGSRDRDKHHERSKDKEGRSKRKEREEENGNREGKKKSRFADGSSERRSRV
EDVAEGSGAMNGASGVEIEGAASYSSTALETTSLAPRHTLPTKVSSIYTKDENRGVSNVR
SHEVHGKSSTDGRTSSTAGESSASSSLDALAKAKKAIELGKGIADRFKKLSSMNQGTKST
SEGSPHTRLQSSTTTPAVSAGTSSASALPHAVFPGPESTSNIEAVRKAQELAAKMAFRHD
PKFSSTLNYFSGQAPTETMAVTQKPTKPPVLRVDALGREIDENGNVISVTKPSNLSTLKV
NINKQKKDAFQILKPQLEVNPEENPHFDPRMGIDKNKILRPKRMSFEFVEEGKWTRDAES
LKLKSQFGEAKARELKVKQAHLAKASDGINPNLIVVSERAPRKEKPKEVIPDVEWWDASV
LTSGIYGDIADGIITDNDLKIEKLTHYIEHPRPIEPPAEAAPPPPQPLKLTKREQKKLRT
QRRLAKEKEKQEMIRQGLLEPPKAKVKMSNLMKVLGPEATQDPTKLEKEIRTAAAEREQA
HVDRNTARKLTPAEKREKKERKLFDDPTTTLETIVSVYKVNKLSHPKTQFKVEMNARQNR
LTGCSVMTEDMSVIVVEGKSKAIKRYGKVMLKRINWEEAVKKDDKEGEEEDEDEEENSEN
NKCWLVWQGSVAKQSFRRFHVQECLTESAAKKVFSDAGVAHYWDLAVNYTDD
NT seq
2319 nt
NT seq
+upstream
nt +downstream
nt
atggcaaacgagagatactccaggagcaactgggacgatcgtgattcgagtgtggatcgt
tcgccggagcgtgaaggcagacaccggaaccaagtccgtgatcgcgatggcgactcgaag
cgtcgcgattcggatcattatcggccgtcgaggcgcgacgatagggaggaagagagagat
agaggtaaggatagagctcgggacagggaagggagtagagatagggataagcatcacgag
aggtctaaggataaggaagggaggagcaagaggaaagagagagaggaagagaatgggaat
agggaagggaagaagaaatctaggtttgctgatgggagtagtgagaggagaagcagggtt
gaggatgtagctgagggttctggggccatgaacggagcttctggcgtcgagattgagggc
gccgcttcatatagttctactgcattggaaacaacttcattggcccctagacacaccctg
cccactaaggtatcttcgatttatacaaaggatgaaaataggggagttagtaatgtcagg
tctcatgaggttcatggaaaatctagtacagatggaagaacatcgtcaacagctggggaa
agtagcgcaagctcgtctcttgatgcattagcgaaagctaagaaagccatagagcttgga
aagggaattgcggatagatttaagaagctttcttcgatgaaccagggtactaagtcaact
tcagaaggtagtccacataccagattgcaatcatcgactaccactcctgctgtctctgca
ggaacatcttctgcttcagcactgccacatgctgtcttccctggccctgagagtacttcc
aatattgaagctgttaggaaagctcaggagttggcagcaaagatggcattccgtcatgat
ccaaagttctcttcaactctcaattatttctcaggacaggcacccacagagacaatggct
gttacacagaaaccgaccaaaccccctgttctgcgtgtggatgcacttggaagggagata
gatgaaaatgggaatgtgattagtgtgactaaaccaagcaatcttagtacattaaaggtt
aacatcaacaaacagaagaaagatgcttttcagattctcaaaccccaattggaagtaaat
ccagaagaaaacccccattttgatccaaggatgggaattgataaaaacaagattttgaga
ccaaaacgtatgagttttgagtttgttgaggaaggcaaatggactagggatgctgagagt
ctgaagttaaagagtcaatttggtgaagcaaaagcaagagaactgaaggtcaagcaagcc
catctggctaaggccagtgatggtatcaatccaaatttgatagtagtatccgaacgtgcc
ccgagaaaagagaagcccaaggaagtaatcccagatgttgagtggtgggatgcaagtgtc
ctcaccagtgggatatatggcgacatagctgatggtatcattaccgataacgacctgaag
atagaaaaactcacacattacattgagcatccgcgtcccatagagccacctgcagaagca
gcgcctccaccaccccagcctcttaaactgacaaagagggaacagaagaagctgcgaacc
cagaggcgtctagcaaaagaaaaggagaaacaggagatgatcagacaaggtttgcttgaa
ccaccaaaagcaaaggtgaaaatgagcaacctgatgaaggttcttgggcctgaagcaaca
caagacccaaccaagcttgaaaaggagatccgcacagcagctgccgaacgtgagcaggct
cacgtggacaggaacacggcaaggaagctaactcctgcagagaaacgtgagaagaaagag
aggaagctcttcgacgatccaacaacaacgctggagacaatagtgtcggtgtacaaggtc
aacaagctttctcatcctaaaactcaattcaaggtggagatgaatgcaagacagaacaga
ttgacgggatgtagtgtgatgaccgaggatatgagtgtgattgtggtggagggcaagagt
aaagcgataaagagatacgggaaggttatgttgaagcggataaactgggaagaggcggtg
aagaaggatgataaggaaggagaggaagaagatgaagacgaagaggagaatagtgaaaat
aacaagtgctggttggtttggcaaggaagcgttgcgaaacagagtttccgtaggtttcat
gtacaagagtgcttaacggaatcagctgccaagaaagtattcagtgatgcaggtgtcgct
cactactgggatctcgctgtcaactacacagacgactaa
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