Brassica napus (rape): 106389567
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Entry
106389567 CDS
T04128
Symbol
BNAC03G58200D
Name
(RefSeq) YTH domain-containing family protein isoform X3
KO
K20102
YTH domain-containing family protein
Organism
bna
Brassica napus (rape)
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bna03019
]
106389567 (BNAC03G58200D)
Messenger RNA biogenesis [BR:
bna03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
106389567 (BNAC03G58200D)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YTH
DUF3942
Motif
Other DBs
NCBI-GeneID:
106389567
NCBI-ProteinID:
XP_013685308
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All DBs
Position
C3:complement(56496242..56499669)
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AA seq
563 aa
AA seq
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MAASNRSTNCSPSTGPVNMVERLSTDKTVLQHQILQDTNSSSSRPLCGTTGNAAFSASSS
GFHTDSSHIGGYENAADTPRSYHPHTDILSFEEVYPVRTSSNGMRYDNMFYHGNGVPSDS
PRKQSLPQHYGDLYADDANYFAPFRSSNQQYPLPEPLNASPEFHISQTNSTHPYRHGNEI
NSFETDYMMRSTRNFGLRDNIFGKPKGLNLNPFTGRRTFLPMASATRSMKHPVSADLSAN
DFDMGSPHRTLHDDFGSSASLSYREQAYNQCRRASFSASSSSSPSSTWERDYNLSPSDEP
RSGSCSDFYHRPAMSDLLTERNRGLRASRPNAKSKMITYDQQDLLSKFRDAKFFVIKSYS
EDNVYKSMKYCVWASTKNGNKKLDAAYREAKTKEVACSVFLLFSVNASAQFCGVAEMVGP
VDFETSVEYWQQDRWSGHFPVKWVIVKDVPNSLFRHIIIEDNDNKPVTNSRDTQEVGVEQ
GIEMINIFNSCEMKSSILDDFSFYEERQRIQDRKARQRALLENLRASSLTSVPTHLASSL
HEDYVREMSKSFAEALALQHKLN
NT seq
1692 nt
NT seq
+upstream
nt +downstream
nt
atggccgcttctaaccgaagcaccaattgttcgccttccactggtccagttaatatggtg
gagaggctatcaactgacaagactgttctccaacatcagattttgcaggacacaaatagc
agcagctctcgccctttgtgtggtactactggtaatgctgctttttctgcaagttcttct
ggttttcacacagactcatctcacattggaggctatgaaaacgcagctgatactccaagg
tcataccatccacatacagatattttaagctttgaagaagtctatcctgtgcgtacatca
tctaacggcatgagatatgacaacatgttttaccatggtaacggtgtaccatcagattct
cccagaaagcaatcgttgccacagcattatggtgacctctatgctgatgatgcaaactat
ttcgctccttttcgctcatcaaatcaacagtatccactcccagaacctcttaatgcttct
ccggagtttcacatctctcagacgaactctacacatccttataggcatgggaacgaaata
aacagttttgagactgattatatgatgcgctctacgaggaactttggcttaagagataat
atatttggaaaacctaagggtctgaatctcaaccccttcactggaagaagaacgtttctt
ccaatggcgtctgccacaagaagtatgaagcatcctgtctctgctgacttatctgcaaat
gattttgatatgggttcaccgcatcgaactttgcatgatgattttggatcttctgcaagc
ttaagttacagagaacaagcttacaatcaatgcagaagagcctctttctctgcttcttcc
tcttcttctcctagctcaacttgggagcgtgattataacttgtcaccatctgatgaacca
agaagtggaagctgcagcgacttttaccatcgccctgccatgtctgatttactcaccgag
agaaacagagggcttagggcttcaaggccaaacgctaaaagcaaaatgatcacttatgat
caacaagatctgctctctaagttcagggatgcaaagttcttcgttattaagtcatatagc
gaggataatgtctacaagagcatgaagtattgtgtttgggcaagcactaaaaacggaaac
aaaaagttggatgccgcttatcgtgaagcaaagactaaagaagtggcatgctcagtcttt
cttttgttctcggtgaatgctagtgcacagttttgtggagtggctgagatggttggaccg
gttgatttcgagacaagtgtggagtactggcaacaggatagatggtcaggacacttcccg
gtcaaatgggtgattgttaaagatgttcccaacagtctctttcgccacatcataattgaa
gacaatgataataagcctgtcactaacagtagagacacccaagaggtgggagtggaacaa
ggcatagagatgataaatatattcaatagctgtgagatgaaatcttcgatcctcgatgac
tttagcttctacgaagagcggcagagaattcaagacagaaaagccagacaacgtgctctt
cttgaaaatctcagagcctcctctctaacctctgttccaacacatctcgcaagttctctc
catgaagactatgtaagggaaatgtccaagagctttgcagaagctttggccttgcaacac
aaactcaattaa
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