Brassica napus (rape): 106389691
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Entry
106389691 CDS
T04128
Name
(RefSeq) geranylgeranyl pyrophosphate synthase 7, chloroplastic
KO
K13789
geranylgeranyl diphosphate synthase, type II [EC:
2.5.1.1
2.5.1.10
2.5.1.29
]
Organism
bna
Brassica napus (rape)
Pathway
bna00900
Terpenoid backbone biosynthesis
bna01100
Metabolic pathways
bna01110
Biosynthesis of secondary metabolites
Module
bna_M00366
C10-C20 isoprenoid biosynthesis, plants
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
106389691
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
bna01006
]
106389691
Enzymes [BR:
bna01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
106389691
2.5.1.10 (2E,6E)-farnesyl diphosphate synthase
106389691
2.5.1.29 geranylgeranyl diphosphate synthase
106389691
Prenyltransferases [BR:
bna01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
106389691
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
polyprenyl_synt
UbiA
Motif
Other DBs
NCBI-GeneID:
106389691
NCBI-ProteinID:
XP_013685469
UniProt:
A0A078FJ87
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Position
C7:complement(5143473..5144868)
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AA seq
359 aa
AA seq
DB search
MSSVKLSSCVHHHSVRKSGSVPGSNRCFLRTPPFLLRQKFTALSVVREESNASIIHQEEA
QSLSFDFMSYMIGKASSVNQALDSAVSLREPVKIHEAMRYSLLAGGKRVRPVLCIAACEL
VGGKESVALPAACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVFGEDVAVLAGDALL
SFAFEHLASTSGVAPARVVRAIGELARAVGSEGLVAGQIVDISSEGMDSNDVGLELLEFI
HVHKTAVLLEAATVLGAIVGGGSDEEIEKLRKFARCIGLMFQVVDDILDVTKSSEELGKT
AGKDLIADKLTYPKLMGLEKSKEFAERLMRDAQEQLQGFDSKKVEPLLALANYIAKRQN
NT seq
1080 nt
NT seq
+upstream
nt +downstream
nt
atgtcaagtgtgaagctaagctcttgtgtacatcatcactctgtcagaaaatctggatcc
gtacccgggtccaacagatgctttctcagaaccccaccgttccttctccgtcaaaagttc
acggcgttatcagtcgtcagagaagagagtaacgccagtatcatccaccaagaggaagca
caaagcctcagcttcgatttcatgtcttacatgatcggcaaagctagctccgtcaaccaa
gctctcgactccgccgtctccctccgcgaaccggtcaagatccacgaggcaatgcgttac
tctctcctcgccggcgggaagcgagtgagaccggttctctgcatcgccgcgtgcgagctg
gtcggcggcaaagaatccgtcgctttgccggcggcttgcgcggtggaaatgatccacacg
atgtcgctgatccacgacgatctcccgtgtatggacaacgacgacctccgccgcggaaaa
cccaccaaccacaaagtgttcggcgaagacgtcgcggttttagccggagacgcgctttta
tcgttcgcgtttgagcacttggcgtcgacgtcgggggtggctccggcgagggtggttaga
gcgatcggggagctggcgagagccgttggatcagaagggcttgtggcgggtcagattgtg
gatatcagcagcgaaggtatggactcaaacgacgtcggattagagctacttgagtttatc
cacgttcacaaaacggcggttttgctggaggcggcgacggtgttaggagcgatcgttggc
ggtgggtctgatgaagagatcgagaagctgaggaagtttgcgagatgcattggtttgatg
tttcaggtggttgatgatatattggatgtgacgaagtcgtccgaggagttggggaaaacc
gccggaaaagatttgatcgccgataagctgacgtatccgaagttgatgggtctcgagaag
tcaaaggagtttgcggagaggttgatgagagatgctcaagaacagcttcaaggatttgat
tcgaaaaaggttgaacctttattggctttggctaattacattgctaaaagacagaactag
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