Brassica napus (rape): 106389706
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Entry
106389706 CDS
T04128
Name
(RefSeq) 25S rRNA (cytosine-C(5))-methyltransferase NOP2A
KO
K14835
25S rRNA (cytosine2870-C5)-methyltransferase [EC:
2.1.1.310
]
Organism
bna
Brassica napus (rape)
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
bna03009
]
106389706
Enzymes [BR:
bna01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.310 25S rRNA (cytosine2870-C5)-methyltransferase
106389706
Ribosome biogenesis [BR:
bna03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
106389706
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Gene cluster
GFIT
Motif
Pfam:
Methyltr_RsmB-F
Methyltr_RsmF_N
RsmF-B_ferredox
Methyltransf_31
FtsJ
Motif
Other DBs
NCBI-GeneID:
106389706
NCBI-ProteinID:
XP_013685491
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All DBs
Position
A2:5440247..5443973
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AA seq
652 aa
AA seq
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MVLTRSSKKAPKPQTPPVKNLSKAQTPPLSKAEKPQTLTLKKGAKSQKKPPLKKQKKDVI
VVEEEDDDEEVSDVESEEIDESDDGEKGSNGFFSDDDGDENDDGEELLGDDFLDGSGDDE
EEVLSSDSDSDSDEDDIQKESEAIDRAKAKEEEDADAELLDFNKEAGPEEHETFRLPTQE
ELEEEARGPPDLPLLQSRIKEIVRALSNFNVLRPNGASRKECVEQLKSDLASYYGYNSFL
IGALFELFPPVELMEIIEAFEKQRPTSIRTNTLKTRRRDLADVLLNRGVNLDPLSKWSKV
GLVVYDSQVPIGATPEYLAGYYMLQGASSFLPVMALAPKENERIVDVAAAPGGKTTYVAA
LMKNTGLIFANEMKVPRLKSLTANLHRMGVTNTIVCNYDGRELPKVLGERSVDRVLLDAP
CSGTGVISKDESVKTSKSLEDIKRFAHLQKQLLLAAIDLVDATSKTGGYIVYSTCSLMVA
ENEAVIDYALKKRNVQLVKTGLDFGQDGYRRFREHRFHPSLKQTKRFYPHVHNMDGFFVA
KLKKMSNMKQSSEDDDEAVETVEQADVSSDDDEEAEAMEEMEKLSVPSKQPKENKERLAK
SKEKKKGKKDGKSKSKNVERKPKKKRSDWKKEIAQAREEKRRAMRENSKGKQ
NT seq
1959 nt
NT seq
+upstream
nt +downstream
nt
atggttctcactcgcagcagcaagaaggcgccgaaacctcaaacccctccggtgaagaac
ctctcgaaagctcagacgcctccgctatcgaaggcggagaaaccacagactctgacattg
aagaaaggagccaagtctcagaagaaacctccattgaagaagcagaagaaggatgttatt
gttgtggaggaggaagatgacgacgaagaggtttccgatgtagaatcagaagagatagat
gaatccgacgatggagagaaaggctctaacggattcttctctgacgacgacggagatgaa
aacgatgacggcgaagagctcttgggtgatgactttctggatggtagtggcgacgacgaa
gaggaggttttgagctctgattctgattcggactcggatgaagacgatattcagaaggaa
tctgaagctattgacagagcgaaagcgaaggaggaggaagatgctgatgctgagcttctc
gatttcaacaaggaagctggacctgaggagcatgagacatttcgcctaccaactcaagag
gagcttgaagaagaagctcgtggaccaccagatcttcctctgctgcagagtagaatcaaa
gagattgttagagctctgtcgaattttaatgtcttgaggccaaatggagccagcaggaaa
gaatgcgttgaacagctcaaatctgatcttgcttcttattatggctataacagttttctt
attggcgctttgtttgagctgtttcctcctgttgaacttatggaaataattgaagccttt
gaaaagcaaaggcctacatctattaggacaaacacacttaagactcgaagacgggatctt
gctgatgtgcttttgaacagaggagtcaatctagacccattaagcaagtggtcaaaagtg
ggacttgttgtttatgattcacaagtgccaatcggtgccactcctgaatatttggctggt
tactacatgcttcaaggtgctagttcgtttttgccagtgatggcccttgcccctaaagag
aacgagcggattgtggatgtagctgctgctcctggtggtaaaacaacttacgttgctgct
ctaatgaaaaatactggtttgatatttgcgaacgagatgaaagtacctaggctcaagtcg
ctaactgccaatctgcatcgcatgggggtcacaaataccatagtttgtaactatgatgga
agagagctacccaaggtgttaggtgagagatcggttgatagagtattgttggatgcaccc
tgcagtgggactggggtcatttcaaaagatgagtcagttaaaacttcgaaatctctagag
gatataaagagatttgctcacttgcaaaagcaacttttactagctgctattgatttggtg
gatgccacatccaaaactggtggatatattgtttactcaacatgttcacttatggttgct
gagaacgaagccgtaattgactatgccctgaaaaagaggaatgttcaacttgttaaaact
ggactcgattttggccaagacggatatagaagatttagagagcaccggtttcatccatct
ttaaagcagactaaacgtttttatcctcatgtacacaacatggacggattctttgtggca
aagctgaagaaaatgagcaacatgaaacaatcgtcagaggatgatgacgaggcggtagaa
actgtagaacaagctgatgtgtctagtgatgatgatgaagaagctgaggcgatggaagag
atggagaagctttctgttcccagtaagcaacccaaggaaaacaaggagagacttgcaaag
tcaaaggagaagaagaaaggcaaaaaagatgggaagtcaaaatctaaaaatgttgagagg
aagccaaagaagaagagatctgattggaagaaggaaattgctcaagctagggaagagaaa
cgaagagccatgagggagaactcgaaggggaagcaatga
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