KEGG   Brassica napus (rape): 106389757
Entry
106389757         CDS       T04128                                 
Name
(RefSeq) serine hydroxymethyltransferase 1, mitochondrial
  KO
K00600  glycine hydroxymethyltransferase [EC:2.1.2.1]
Organism
bna  Brassica napus (rape)
Pathway
bna00260  Glycine, serine and threonine metabolism
bna00460  Cyanoamino acid metabolism
bna00630  Glyoxylate and dicarboxylate metabolism
bna00670  One carbon pool by folate
bna01100  Metabolic pathways
bna01110  Biosynthesis of secondary metabolites
bna01200  Carbon metabolism
bna01230  Biosynthesis of amino acids
bna01240  Biosynthesis of cofactors
bna04981  Folate transport and metabolism
Module
bna_M00532  Photorespiration
Brite
KEGG Orthology (KO) [BR:bna00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00630 Glyoxylate and dicarboxylate metabolism
    106389757
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    106389757
  09106 Metabolism of other amino acids
   00460 Cyanoamino acid metabolism
    106389757
  09108 Metabolism of cofactors and vitamins
   00670 One carbon pool by folate
    106389757
 09150 Organismal Systems
  09154 Digestive system
   04981 Folate transport and metabolism
    106389757
Enzymes [BR:bna01000]
 2. Transferases
  2.1  Transferring one-carbon groups
   2.1.2  Hydroxymethyl-, formyl- and related transferases
    2.1.2.1  glycine hydroxymethyltransferase
     106389757
SSDB
Motif
Pfam: SHMT
Other DBs
NCBI-GeneID: 106389757
NCBI-ProteinID: XP_013685553
UniProt: A0A078IJU5
LinkDB
Position
C3:60167735..60170876
AA seq 517 aa
MAMAMALRRLSSSVDKPIRPLIRSTTCYMSSLPSEAVDDKERSRVTWPKKLNASLEEVDP
EIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDM
AETLCQKRALEAFRLDPEKWGVNVQPLSGSPANFHVYTALLKPHERIMALDLPHGGHLSH
GYQTDTKKISAVSIFFETMPYRLDESTGYIDYDQMEKSATLFRPKLIVAGASAYARLYDY
ARIRKVCNKQKAVMLADMAHISGLVAAGVIPSPFDYADVVTTTTHKSLRGPRGAMIFYRK
GVKEINKQGKEVLYDFEDKINQAVFPGLQGGPHNHTITGLAVALKQATTSEYKAYQEQVL
SNSAKFAQTLMEKGYELVSGGTDNHLVLVNLKPKGIDGSRVEKVLEAVHIASNKNTVPGD
VSAMVPGGIRMGTPALTSRGFVEEDFAKVAEYFDKAVTLALKVKSEAQGTKLKDFVSAME
ASSTIQSEIAKLRHEVEEFAKQFPTIGFEKETMKYKN
NT seq 1554 nt   +upstreamnt  +downstreamnt
atggcgatggccatggctcttcggcgactttcttcttcagttgacaaacctattcgtcct
cttatcagatcaactacatgctacatgtcatctctgcccagtgaagctgttgatgacaag
gagagatctcgtgtcacttggccaaaaaagcttaacgcatctttggaggaggttgatcct
gagattgctgacattattgagcatgagaaagctagacaatggaagggacttgaactcatt
ccatctgagaatttcacatctgtctcggtgatgcaagctgttggctctgtgatgactaac
aagtacagtgaagggtaccctggtgctagatactatggaggaaatgagtacatagacatg
gcagagactttatgccaaaagcgcgctcttgaggctttcagattagatcctgaaaagtgg
ggagtgaatgtgcaacccttgtctggatctcctgccaacttccatgtctacactgcattg
ctcaaacctcatgagagaatcatggcacttgatcttcctcatggtggtcatctttctcat
ggttatcagactgacaccaagaagatatctgctgtgtctatcttctttgagacaatgcct
tatcgcttggacgagagcactggctacattgactatgatcagatggagaaaagtgctact
cttttcaggccaaaactgattgttgctggtgcgagtgcttatgctcgattgtatgactat
gcccgcatccgaaaggtgtgtaacaagcaaaaagctgtgatgctagcagatatggcacac
atcagtggtttggttgctgctggtgtaatcccttcaccgttcgactatgcagatgttgtg
accaccacaactcacaagtcacttcgtggaccccgtggagccatgattttctacagaaag
ggtgttaaagaaattaacaaacaagggaaagaggttttgtatgattttgaagacaagata
aatcaagccgtcttccctggtcttcaaggtggtccacataaccacactattacaggacta
gctgttgctttaaaacaggcaactacttcagagtacaaagcataccaagagcaagtcctg
agcaactctgcaaagttcgctcagactctgatggagaaaggttatgaacttgtttctggt
ggaaccgacaaccatctggttctagtgaacctgaagcccaagggaattgatggatctaga
gttgagaaagtgttggaagctgttcacattgcatcaaacaaaaacactgttcctggagat
gtttctgccatggttcctggtggaatcagaatgggtacacctgctctcacttccagaggc
tttgttgaggaagactttgctaaagtagctgaatactttgacaaagctgtaacgttggct
ctcaaagtcaaatctgaagctcaagggaccaagctgaaagactttgtgtcagcaatggaa
gcttcttcaaccattcaatcagagattgctaagctgcgccatgaagttgaggaatttgct
aaacagtttccaacaattgggtttgagaaagaaaccatgaagtacaagaactaa

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