Brassica napus (rape): 106389859
Help
Entry
106389859 CDS
T04128
Name
(RefSeq) DNA topoisomerase 1 alpha-like
KO
K03163
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
bna
Brassica napus (rape)
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bna03032
]
106389859
Enzymes [BR:
bna01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
106389859
DNA replication proteins [BR:
bna03032
]
Eukaryotic type
DNA Topoisomerases
106389859
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I_N
Topoisom_I
Topo_C_assoc
CC149
Motif
Other DBs
NCBI-GeneID:
106389859
NCBI-ProteinID:
XP_013685667
LinkDB
All DBs
Position
A2:5569505..5576200
Genome browser
AA seq
980 aa
AA seq
DB search
MDTETVSNAVIENECVEDSDDDKPIGFKRTSGVVSNSNQSKSNTQRSNAVSPLKSPVTTP
NGTTPSNKTSAMTSSKASTAKSSLQNEEDSDDDKPIVFKRTSVASNSKSSTQKSNAVSST
KVLPLKSPVTGPNGTTPLNKTSSSKASPAKPPLRNDTTPSAVKGKSQLKNDQSECKSERE
DSEDERPLSSILSGNSSRSNKGPASSKQVSSPQPEKKNTAGRPLGGANRVVKDESDDEKP
ISSVFQKKTGSSGMSGSKKVSSDEKKPLTKKLHQNGSAVKSEVPDCKVSGKRPLEKNHPA
NESSLKKPKVSASSTSGKMKQESVKTESSADKGRVLVSPTAKRAKPVSTKEDVSDDDDDV
PISKRLKSESSSSKVSAAKPKAVKGSSTSAAKTKVTKVVSPPSRSRTVNKNSKKVTKDSK
YSSSSKSSPSSSDGQTKWTTLEHNGVIFPPPYKPHGIKILYKGKPVDLTIEQEEVATMFA
VMKETDYYTKPQFRENFWNDWRKLLGKKHVIQKLDDCDFTPIYEWHLREKEKKKQMSTEE
KKALKEEKLKLEEKYMWAVVDGVKEKVGNFRVEPPGLFRGRGEHPKMGKLKKRIHPSDIT
MNIGKGVPVPECPIPGEKWKDVKHDNTVTWLAFWNDPINPKEFKYVFLAASSAMKGLSDK
EKYEKARNLTNHIDSIRATYTKNFTSKDVAKKQIAVATYLIDKLALRAGNEKDDDEADTV
GCCTLKVGNVECIPPNQIKFDFLGKDSIRYENTVVVEPLVYKAIGQFQAGKSKEDDLFDE
LDTSKLNAHLKELVPGLTAKVFRTYNASFTLDEQLNEKMGAGDVTQKVVVYQQANKKVAI
ICNHQRAVSKSHSAQIEKLDAKLKELQNGLGELRTNLKRAKEGKPPVEGSDGKKPRNLDP
NAWEKKIAQQEVKIEKMKRDMQTKEDLKTVALGTSKINYLDPRITVAWCKRNEVPIEKIF
TKSLLEKFSWAMDAEPSFRF
NT seq
2943 nt
NT seq
+upstream
nt +downstream
nt
atggataccgagactgtttcaaacgctgtgatagagaatgagtgtgtagaggacagcgat
gatgataagcctatcgggttcaagaggacaagcggtgttgtttctaattcgaatcaatca
aaatccaatactcagagaagcaatgcagtgtctcctttgaagtctcctgtgacgacccct
aatggaaccactccttccaataaaacttctgcaatgacatcttctaaagcttcaacagca
aagtcatcgttgcagaatgaagaggacagcgatgatgacaagcctatcgtgttcaagagg
actagtgttgcatctaattcaaaatccagtactcagaagagcaacgcagtgtcttccacc
aaggtgttacctttgaagtctcctgtgactggcccaaatggtaccactcctttgaataaa
acttcttcttctaaagcttcaccagcaaagccaccattgaggaatgatactacgccctct
gctgttaagggtaagagccagttaaagaatgatcagtctgaatgtaaaagcgagcgtgag
gattcggaggatgagagacctttaagttctatactatctgggaactccagtcgctcaaat
aaagggccagcctcttcgaagcaggtttcttcaccgcagccagagaaaaagaatactgcc
ggtcgacctcttggtggagcaaatagagtcgtaaaagacgagtcagatgatgaaaaacca
atctcgtcagtgttccaaaagaagactggcagtagtgggatgtcaggtagcaaaaaggtc
tccagtgatgaaaagaaacctttgacgaaaaagctgcatcagaatggttctgcagttaag
agcgaagtgccggattgtaaagtctcaggtaagagacctctggagaagaatcatcctgca
aatgaatcttccttgaagaagcccaaggtctcagcttcaagtacatcagggaagatgaaa
caagaatctgttaaaacagagagttctgctgataagggaagggttttggtttcacctaca
gccaagagagcgaaaccagtatctaccaaggaagatgtctctgatgacgatgacgatgtt
ccaatatccaagagactcaaatcagagtcctccagcagtaaagtatcagctgcaaagcct
aaagcagtaaaaggaagttctacatcagctgcaaagacgaaagtaacaaaagtggtttct
cctccgtccaggtccaggacagtgaacaaaaactccaagaaagtaacgaaggattcgaaa
tattcctcgtcttccaaatcttcaccttcctctagtgatgggcaaacgaagtggacgacc
ttggagcacaacggagtaatttttccgcctccgtataagccgcacggcatcaagattttg
tacaaggggaagccagtcgacctaacaatcgaacaagaagaggttgcaacaatgtttgca
gtgatgaaagagacggactattacactaaaccgcaatttagggagaatttttggaatgac
tggcgaaaactgcttgggaagaagcatgtgatacagaagttagatgattgtgacttcact
cccatatatgagtggcatttgagagagaaagagaagaagaaacaaatgagcacagaggag
aaaaaagctttgaaagaagaaaaactgaagctagaggagaaatatatgtgggctgttgtt
gacggtgtaaaagagaaggttggtaatttcagagttgaaccgcctgggctcttcagaggc
cgtggagagcatcccaagatgggaaaattaaagaagcgtatccatccatctgatatcacc
atgaatattgggaaaggtgttcctgttccagaatgtccgatccctggtgaaaaatggaaa
gacgtaaagcatgacaacacagtcacgtggctagctttctggaatgatcccattaaccca
aaagaattcaagtatgtgtttttggcagctagcagtgccatgaaagggctgagcgacaag
gagaagtatgagaaagccagaaatctcacgaaccacatagacagtataagagcaacttac
acgaagaatttcacatccaaggatgttgcaaagaagcaaattgccgttgctacttatctc
attgataaactggcactcagggctggaaatgagaaggatgatgatgaggcagacactgtt
ggttgttgtacattgaaggttggaaatgtggaatgtattcctccaaatcaaataaagttt
gactttctcggtaaagattcaatccggtatgagaacacagtcgtggttgagcctcttgtt
tacaaggccattggacaattccaggctggaaaatccaaagaggatgatctatttgatgag
ttagacacaagcaaattgaatgctcatcttaaagagcttgtacctggtctcacagctaaa
gtgttccgtacatataatgcttcattcacattggatgaacagttgaatgaaaagatggga
gctggagatgttactcagaaagtagtagtttatcagcaagcaaacaagaaggttgccata
atctgtaatcatcagcgtgctgtttcaaagtcacacagtgcacaaatcgaaaaactggat
gcgaaattgaaagaactccagaatggtcttggagagctcagaaccaatctcaagcgagct
aaagaggggaaaccaccagtggaaggttctgatggaaagaagccaagaaacttagatcca
aacgcgtgggagaagaagatagctcaacaggaagtaaagatagagaagatgaaacgagac
atgcaaacaaaagaggacttgaaaacagtggcgcttggcacgtctaagataaattacctt
gatcctaggataaccgtggcatggtgcaaacgtaatgaagtaccaatcgaaaagatattc
accaagtctctactggagaagttttcatgggcaatggatgcagaaccaagcttcagattc
tag
DBGET
integrated database retrieval system
