Brassica napus (rape): 106389894
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Entry
106389894 CDS
T04128
Name
(RefSeq) DNA damage-binding protein 1b
KO
K10610
DNA damage-binding protein 1
Organism
bna
Brassica napus (rape)
Pathway
bna03420
Nucleotide excision repair
bna04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
106389894
09124 Replication and repair
03420 Nucleotide excision repair
106389894
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
bna04121
]
106389894
03400 DNA repair and recombination proteins [BR:
bna03400
]
106389894
Ubiquitin system [BR:
bna04121
]
Ubiquitin ligases (E3)
Multi subunit Ring-finger type E3
Cul4 complex
Adoptor protein
106389894
DNA repair and recombination proteins [BR:
bna03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Cul4-DDB2 complex
106389894
TCR (transcription coupled repair) factors
Cul4-CSA complex
106389894
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MMS1_N
CPSF_A
Motif
Other DBs
NCBI-GeneID:
106389894
NCBI-ProteinID:
XP_013685698
UniProt:
A0A816IPS8
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All DBs
Position
C3:65379778..65386252
Genome browser
AA seq
1088 aa
AA seq
DB search
MSVWNYVVTAQKPTSVTHSCVGNLTSPQELNLIVAKCTRFEIHLLTPQGLQAILDVPLYG
RIATLELFRPHGETQDFLFIATEGYKFCVLQWDSDSSELITRAMGDVSDRIGRQTDNGQI
GIIDPDCRFIGLHLYDGLFKVVPFDNKGQLKEAYNIRLEELQVLDIKFLYGCAKPTIAVL
YQDNKDARHVKTYEVSQKEKDFVEGPWSQNNLDNGADLLIPVPSPLCGVLIIGEETIVYC
SANALKAIPIRSSITKAYGRVDVDGSRYLLGDHAGLIHLLVITHEKEKVTGLKIELLGET
SIASTISYLDNAVVFIGSSYGDSQLIKLNMQPDANGSYVEIIEQYVNLGPIVDFCVVDLE
RQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELPGIKGIWSLKSSIDDAFDTFLVVS
FISETRILAMNIEDELEDTEIEGFLSQVQTLFCHDAVYNQLVQITSNSVRLVSSTTRELR
NKWDAPAGFTVNVATANASQVLLATGGGHLVYIEIGDGTLTEVKHAQLEYEVSCLDINPT
GDNPNYSQLAAVGMWTDISVRIFVLPDLTLITKEQLGGEIIPRSVLLCAFEGISYLLCAL
GDGHLLNFQLDTSTGELRDRKKVSLGTQPITLRTFSSKSATHVFAASDRPSVIYSNNKKL
IYSNVNLKEVSHMCPFNSGAFPDSLAIAREGELTIGTIDEIQKLHIRTIPIGEHARRICH
QEQTRTFAICSLRNQPSAEESEMHFVRLLDDRDFEFLATYPLDAFEYGCSILSGSFTDDK
NVYYCVGTSYVLPEENEPTKGRILVFVVEEGKLQLVAEKETKGSVYSLNAFNGKLLAAIN
QKIQLYKWTLRDDGTRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGA
IEEIARDYNASWMTAVGILDDDTYLGADNCYNLFTVKRHSEAATDEERCRMEVVGEYHIG
EFVNRFRHGSLVTRLPDSETSQIPTMIFGTVNGVIGVMASLPQEQYAFLEKLQTSMRKVI
KGVGGLSHEQWRSFKNEKRSADARSFLDGDLIESFMDLSRRKMEEISKGMDVQVEELCKR
VEELTRLH
NT seq
3267 nt
NT seq
+upstream
nt +downstream
nt
atgagcgtatggaactacgtcgtcacggctcagaaaccaacctctgtcactcactcttgc
gtcggaaacctcaccagtccccaggagctcaatctcattgtcgcgaaatgcactcgcttc
gagatccatctgcttactccacagggacttcaggctatactggatgttcctctatatggg
agaatcgctactttggaattgttccgtccccacggtgaaacacaagattttttgttcatt
gcaactgagggatataaattctgtgttcttcagtgggattctgattcctccgagcttatt
acaagggcaatgggggatgtctctgatcgtataggcagacagaccgacaatggtcagatt
ggtataattgatcctgattgcagattcattggcctccatctgtatgacggcttgtttaag
gtggttccatttgacaataaaggacagctcaaggaagcttataacataaggttggaggag
ttgcaggtcctggatatcaagtttctgtatggatgcgcaaagccaacaatcgcagtactt
tatcaggacaacaaagatgctcgtcatgtaaaaacatatgaagtttctcagaaggagaaa
gattttgtcgaaggaccatggtcacagaacaatcttgacaatggtgctgacctattgatc
cctgtgccttcacctctgtgtggggtccttatcattggagaagaaacaattgtgtattgt
agtgccaatgcactcaaagctataccaataagatcttccatcacaaaggcatatggaaga
gttgatgttgatggctctaggtatcttcttggtgaccatgccggactgatccacctcctt
gttataacccacgagaaagaaaaggtcactggcctcaaaattgagcttttgggtgaaaca
tcgattgcatctaccatctcctatcttgacaatgctgtcgtctttatcggctcaagctat
ggagattcacagcttataaagttaaacatgcagccggatgcaaacggttcatatgtagaa
attatagaacagtatgtcaacttggggcctattgtcgacttttgtgtagttgaccttgag
agacaggggcaaggtcaggttgtaacttgctctggagcatacaaggatggttctcttcgc
atagttcgtaatgggataggaataaatgaacaggcgtcagtggaacttccaggaatcaaa
ggaatatggtcgctgaaatcttcaattgatgacgcctttgatacattcctggtagttagt
ttcatcagtgaaactcgtatcttagccatgaacatagaggatgaactggaagacacagag
attgagggtttcttgtctcaagtccagactttattttgtcatgatgctgtctacaaccaa
cttgtacagattacttcaaattctgtgaggctagtcagttcgacaactagagaattgcgg
aataaatgggatgccccagctggattcactgttaatgttgcaactgcaaatgctagccag
gttcttttggcgactggaggtggacatttggtctatatagaaattggagatgggacattg
acggaagtcaaacatgcccagttggagtacgaggtttcttgtcttgatataaaccccact
ggggacaatcctaattacagtcagctagctgcggtggggatgtggacagatataagtgta
cggatttttgtgctgccggacttgactcttatcactaaggagcaactaggaggagagata
attccccgatctgttcttctttgtgcattcgaagggatatcttacttgctgtgtgctctt
ggagatggccatctattaaacttccagttggatacgagcactggggagttgagagatcgg
aaaaaagtatcgcttgggactcagcctataactctgcgtacgttttcatctaaaagtgca
acgcatgtcttcgctgcatcagatagaccgtctgttatatatagcaacaacaagaagctg
atatacagcaacgtgaatttgaaagaagttagtcacatgtgtcccttcaactctggtgct
tttccagacagcttagcgattgctagggaaggggaacttactattggtaccatcgatgag
attcagaagcttcacatacgcactattcccattggagagcacgctcgccgtatctgccat
caggaacaaacgcgaacatttgctatctgcagtttgagaaaccaaccgagtgcagaagaa
tctgagatgcattttgtccgtctgttggatgaccgagatttcgaattcttggcaacttac
cctttggatgcctttgaatacggttgctccatactgagcggctcttttaccgacgacaaa
aacgtttactattgtgtcggtacttcatatgttttgcctgaggagaacgaaccaacgaag
ggaaggatacttgtgtttgtagttgaagaaggaaagctgcagctggtagcagagaaggaa
actaaaggatctgtttattctcttaatgccttcaatggaaaacttctagctgctattaat
cagaaaattcagttgtataaatggacgttgcgggatgatggaactcgggagctccagtct
gaatgtggacatcacggtcacatactagctctctacgttcagacccgtggagacttcatc
gtcgttggtgacctcatgaagtcaatctccttattgatctacaagcacgaggaaggtgcg
atcgaggagatagctcgagactataatgcaagctggatgacggcagttgggatactagat
gatgacacgtacctcggtgctgacaattgctacaacctattcacagtgaagaggcacagt
gaagctgctacagatgaagaacggtgtcgcatggaggtggttggtgagtatcacattggg
gaatttgtgaaccgattccgccatggatctctggtcacgaggctgcctgattcagaaact
agtcagataccgactatgatctttggcactgtcaacggtgtgatcggagtgatggcttcg
ctgccgcaagaacagtatgcgtttctggagaaactgcagacgagtatgaggaaagtgatc
aaaggagttggcggtttgagccatgagcagtggagatcgttcaagaacgagaagagaagt
gcagatgcgaggagtttcttggatggggatttgatagaatcgttcatggatctgagcagg
aggaagatggaggagatatctaaagggatggatgtgcaagtggaagaattgtgtaagaga
gttgaggaactcacaaggcttcactga
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integrated database retrieval system