KEGG   Brassica napus (rape): 106389894
Entry
106389894         CDS       T04128                                 
Name
(RefSeq) DNA damage-binding protein 1b
  KO
K10610  DNA damage-binding protein 1
Organism
bna  Brassica napus (rape)
Pathway
bna03420  Nucleotide excision repair
bna04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:bna00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    106389894
  09124 Replication and repair
   03420 Nucleotide excision repair
    106389894
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:bna04121]
    106389894
   03400 DNA repair and recombination proteins [BR:bna03400]
    106389894
Ubiquitin system [BR:bna04121]
 Ubiquitin ligases (E3)
  Multi subunit Ring-finger type E3
   Cul4 complex
    Adoptor protein
     106389894
DNA repair and recombination proteins [BR:bna03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     Cul4-DDB2 complex
      106389894
    TCR (transcription coupled repair) factors
     Cul4-CSA complex
      106389894
SSDB
Motif
Pfam: MMS1_N CPSF_A
Other DBs
NCBI-GeneID: 106389894
NCBI-ProteinID: XP_013685698
UniProt: A0A816IPS8
LinkDB
Position
C3:65379778..65386252
AA seq 1088 aa
MSVWNYVVTAQKPTSVTHSCVGNLTSPQELNLIVAKCTRFEIHLLTPQGLQAILDVPLYG
RIATLELFRPHGETQDFLFIATEGYKFCVLQWDSDSSELITRAMGDVSDRIGRQTDNGQI
GIIDPDCRFIGLHLYDGLFKVVPFDNKGQLKEAYNIRLEELQVLDIKFLYGCAKPTIAVL
YQDNKDARHVKTYEVSQKEKDFVEGPWSQNNLDNGADLLIPVPSPLCGVLIIGEETIVYC
SANALKAIPIRSSITKAYGRVDVDGSRYLLGDHAGLIHLLVITHEKEKVTGLKIELLGET
SIASTISYLDNAVVFIGSSYGDSQLIKLNMQPDANGSYVEIIEQYVNLGPIVDFCVVDLE
RQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELPGIKGIWSLKSSIDDAFDTFLVVS
FISETRILAMNIEDELEDTEIEGFLSQVQTLFCHDAVYNQLVQITSNSVRLVSSTTRELR
NKWDAPAGFTVNVATANASQVLLATGGGHLVYIEIGDGTLTEVKHAQLEYEVSCLDINPT
GDNPNYSQLAAVGMWTDISVRIFVLPDLTLITKEQLGGEIIPRSVLLCAFEGISYLLCAL
GDGHLLNFQLDTSTGELRDRKKVSLGTQPITLRTFSSKSATHVFAASDRPSVIYSNNKKL
IYSNVNLKEVSHMCPFNSGAFPDSLAIAREGELTIGTIDEIQKLHIRTIPIGEHARRICH
QEQTRTFAICSLRNQPSAEESEMHFVRLLDDRDFEFLATYPLDAFEYGCSILSGSFTDDK
NVYYCVGTSYVLPEENEPTKGRILVFVVEEGKLQLVAEKETKGSVYSLNAFNGKLLAAIN
QKIQLYKWTLRDDGTRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGA
IEEIARDYNASWMTAVGILDDDTYLGADNCYNLFTVKRHSEAATDEERCRMEVVGEYHIG
EFVNRFRHGSLVTRLPDSETSQIPTMIFGTVNGVIGVMASLPQEQYAFLEKLQTSMRKVI
KGVGGLSHEQWRSFKNEKRSADARSFLDGDLIESFMDLSRRKMEEISKGMDVQVEELCKR
VEELTRLH
NT seq 3267 nt   +upstreamnt  +downstreamnt
atgagcgtatggaactacgtcgtcacggctcagaaaccaacctctgtcactcactcttgc
gtcggaaacctcaccagtccccaggagctcaatctcattgtcgcgaaatgcactcgcttc
gagatccatctgcttactccacagggacttcaggctatactggatgttcctctatatggg
agaatcgctactttggaattgttccgtccccacggtgaaacacaagattttttgttcatt
gcaactgagggatataaattctgtgttcttcagtgggattctgattcctccgagcttatt
acaagggcaatgggggatgtctctgatcgtataggcagacagaccgacaatggtcagatt
ggtataattgatcctgattgcagattcattggcctccatctgtatgacggcttgtttaag
gtggttccatttgacaataaaggacagctcaaggaagcttataacataaggttggaggag
ttgcaggtcctggatatcaagtttctgtatggatgcgcaaagccaacaatcgcagtactt
tatcaggacaacaaagatgctcgtcatgtaaaaacatatgaagtttctcagaaggagaaa
gattttgtcgaaggaccatggtcacagaacaatcttgacaatggtgctgacctattgatc
cctgtgccttcacctctgtgtggggtccttatcattggagaagaaacaattgtgtattgt
agtgccaatgcactcaaagctataccaataagatcttccatcacaaaggcatatggaaga
gttgatgttgatggctctaggtatcttcttggtgaccatgccggactgatccacctcctt
gttataacccacgagaaagaaaaggtcactggcctcaaaattgagcttttgggtgaaaca
tcgattgcatctaccatctcctatcttgacaatgctgtcgtctttatcggctcaagctat
ggagattcacagcttataaagttaaacatgcagccggatgcaaacggttcatatgtagaa
attatagaacagtatgtcaacttggggcctattgtcgacttttgtgtagttgaccttgag
agacaggggcaaggtcaggttgtaacttgctctggagcatacaaggatggttctcttcgc
atagttcgtaatgggataggaataaatgaacaggcgtcagtggaacttccaggaatcaaa
ggaatatggtcgctgaaatcttcaattgatgacgcctttgatacattcctggtagttagt
ttcatcagtgaaactcgtatcttagccatgaacatagaggatgaactggaagacacagag
attgagggtttcttgtctcaagtccagactttattttgtcatgatgctgtctacaaccaa
cttgtacagattacttcaaattctgtgaggctagtcagttcgacaactagagaattgcgg
aataaatgggatgccccagctggattcactgttaatgttgcaactgcaaatgctagccag
gttcttttggcgactggaggtggacatttggtctatatagaaattggagatgggacattg
acggaagtcaaacatgcccagttggagtacgaggtttcttgtcttgatataaaccccact
ggggacaatcctaattacagtcagctagctgcggtggggatgtggacagatataagtgta
cggatttttgtgctgccggacttgactcttatcactaaggagcaactaggaggagagata
attccccgatctgttcttctttgtgcattcgaagggatatcttacttgctgtgtgctctt
ggagatggccatctattaaacttccagttggatacgagcactggggagttgagagatcgg
aaaaaagtatcgcttgggactcagcctataactctgcgtacgttttcatctaaaagtgca
acgcatgtcttcgctgcatcagatagaccgtctgttatatatagcaacaacaagaagctg
atatacagcaacgtgaatttgaaagaagttagtcacatgtgtcccttcaactctggtgct
tttccagacagcttagcgattgctagggaaggggaacttactattggtaccatcgatgag
attcagaagcttcacatacgcactattcccattggagagcacgctcgccgtatctgccat
caggaacaaacgcgaacatttgctatctgcagtttgagaaaccaaccgagtgcagaagaa
tctgagatgcattttgtccgtctgttggatgaccgagatttcgaattcttggcaacttac
cctttggatgcctttgaatacggttgctccatactgagcggctcttttaccgacgacaaa
aacgtttactattgtgtcggtacttcatatgttttgcctgaggagaacgaaccaacgaag
ggaaggatacttgtgtttgtagttgaagaaggaaagctgcagctggtagcagagaaggaa
actaaaggatctgtttattctcttaatgccttcaatggaaaacttctagctgctattaat
cagaaaattcagttgtataaatggacgttgcgggatgatggaactcgggagctccagtct
gaatgtggacatcacggtcacatactagctctctacgttcagacccgtggagacttcatc
gtcgttggtgacctcatgaagtcaatctccttattgatctacaagcacgaggaaggtgcg
atcgaggagatagctcgagactataatgcaagctggatgacggcagttgggatactagat
gatgacacgtacctcggtgctgacaattgctacaacctattcacagtgaagaggcacagt
gaagctgctacagatgaagaacggtgtcgcatggaggtggttggtgagtatcacattggg
gaatttgtgaaccgattccgccatggatctctggtcacgaggctgcctgattcagaaact
agtcagataccgactatgatctttggcactgtcaacggtgtgatcggagtgatggcttcg
ctgccgcaagaacagtatgcgtttctggagaaactgcagacgagtatgaggaaagtgatc
aaaggagttggcggtttgagccatgagcagtggagatcgttcaagaacgagaagagaagt
gcagatgcgaggagtttcttggatggggatttgatagaatcgttcatggatctgagcagg
aggaagatggaggagatatctaaagggatggatgtgcaagtggaagaattgtgtaagaga
gttgaggaactcacaaggcttcactga

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