Brassica napus (rape): 106390039
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Entry
106390039 CDS
T04128
Name
(RefSeq) DDB1- and CUL4-associated factor homolog 1-like isoform X2
KO
K11789
DDB1- and CUL4-associated factor 1 [EC:
2.7.11.1
]
Organism
bna
Brassica napus (rape)
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
bna01001
]
106390039
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
bna04121
]
106390039
Enzymes [BR:
bna01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
106390039
Protein kinases [BR:
bna01001
]
Serine/threonine kinases: Other
Other
106390039
Ubiquitin system [BR:
bna04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
106390039
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_Prp19
WD40_WDHD1_1st
LisH
WD40_CDC20-Fz
Beta-prop_EML_2
ANAPC4_WD40
Beta-prop_DCAF4
WDR90_beta-prop_4th
EIF3I
WD40_MABP1-WDR62_2nd
Motif
Other DBs
NCBI-GeneID:
106390039
NCBI-ProteinID:
XP_013685870
LinkDB
All DBs
Position
C3:complement(69645241..69652288)
Genome browser
AA seq
1897 aa
AA seq
DB search
MDGQGNEPEVPNPTAESEQLALAVEAETETENSTGGGGGDNPKEDGLIEKAQKLMEHITA
GANNPNPTVLHALSHLLESQESLFIKENGFYSNGRGSHISGKLCKLIKENDEFFELISST
FLSENTYSTAVKAASARLLMNWLLTWTHPYVFDDAVTENFKKWVLEEAVKFPGEHSGSSE
ASDSEMLKTYSTGLLAHSLTSRGQLVEDVLTSGLSAKLMHYLRVRVIGEASTSRRDALHA
TEAKHVSLKTKEDGRSRVRRVVDTVEGDHVLEGESGRETDVLSEGELEIDGRDRCNVPAV
FDGKMKPGEDNTGRDDPSRNRLNRSKSRARGKVNEGATNTDSLLASPTSGRLGVRDRDQS
KNLDVRNAEDGTIWLGKMKSGIMEIEREKNDECFQDCVIGTKNITDIVKRAVGAAETEAR
AAHAPDEAVKAAGDAAAELVKTAALEEFKSSGSEEAAVAAARRAATTVIDAAEVSRNPTC
VTSDQTAGTSSVETDAIVDVGEVSLPDIESLAQLQEKYCIQCLEILGEYVEVLGPVLHEK
GVDVCITLLERTSQLGDSFTLSPLLPDVMKLICALAAHRKFAAMFVDRGGLQKLLAVPRV
TETFYGLSSCLYTIGSLQGIMERVCALPSDLIHQVVKLAIELLDCSQDQARKNSALFFAA
AFVFRAILDAFDAHNSLQKLLAILKDAASVRTGANSDRSPPEVMTSSEKQMAFHTCFALR
QYFRAHLLLLVESIRPSRSGRGGVPKVPNIRAAHKPLDISNEAVDAVFLQLQKDRKLGPT
FVRTQWPAVNNFLASSGHVTMLELCQTPPVDRYLHDLLQYAFGVLHIVTSIPDGRKAIVT
ATLSNNRAGIAVILDATNISNSIVDPEIIQPALNVLINLVCPPPSLSNKPLLVQNHQPVP
DQATARPSTDVPADNAPPTPVAPASSGLVGDRRIFLGAGTGSAGLAAKLEQVYRQAREAV
RGNDGIKILLKLLQPRIYVNPPATPDCLRALACRVLLGLARDDTIAQILTKLEVGRSLSE
LIRDSGGQSSGTDQVRWQAELTQVALELIGIVTNSGHANTLTASDAATPTLRRIERAAIA
AATPITYDSKELLLLIHEHLQASGLGETASALLKEAQLNPLPSLAPPSSIAYSATQEISA
PVAQVQWPSGRASGGFFNSKPEVCAHDEDPNSRCNAALSAKKKQLASSTPETSTPVAQQQ
WPSGRTNSGFFPSKPKVNAHEEDPSSRGNAAPSAKKKQLTFSPSFSSQSRKQSLSQDTQA
QSMQRINSNSNSDPACADTTEAAAEIVLKNDLDADAQFKTPTFPRKRKLSELRETEMSTS
SKRINLGELGPRTPACPTTASLRRNSTIAEASGFQTPASALDVNQSGSSRLGQMTPASQL
RLPSDPQPSERLSLDSLVVQYLKHQHRQCRAPITTLPPVSLLHPHVCPEPKRLLEAPLNI
TDRLGTRELQSYYSGVHGNRRDRQFVFSRFKSWRSYRDETALFTSISLLGGTNHLAVGSH
AGEIKIFDASSGNMLESVSGHQAPVTLVQSHVSGDTQLLLSSSYSDVQLWDASNITVGSK
HSFDGCKAAKFSNSGSLIAALSSEGPTKDVLLYNVETGSLSEKFTDPDTSSRTSPYSLVH
FNPCDSLILWNGHLWDRRIPNSCKRFDQFTDYGGGGFHPSRNEVIINSEVWDLRNMNTRL
IRSVPSLDQTAITFNSRGDVIYAMLRRNIEDVMSAVNTRRAKHPLFAAFRTLDAVNYSDI
GTIPVDRCLLDFATEPTDSFLGLITMEDQDDMFSSARMYEIGRRRPTDDDSDPDDDGETE
DEDEDDEDDEDDLDRILGLAGDDSDSGDDDMSSDDNEDNSASDFDDDDGGMFFDGGIMEI
VSDGDDEDDIGDSDGEDSADDGDSISSGEEDFLNSIH
NT seq
5694 nt
NT seq
+upstream
nt +downstream
nt
atggacggccaagggaacgaacccgaggtccctaatcccacggccgagagcgaacaatta
gctctcgcggtggaggcggagacggagacggagaattcaaccggcggaggaggaggagat
aaccctaaagaagatgggcttatagagaaggcgcagaagctcatggaacatatcaccgcc
ggggctaataaccccaaccctactgtcctccacgctcttagccacctcctcgaatctcag
gagtctttgtttataaaggagaatgggttctactctaatggtcgtggtagtcatatcagt
ggcaagctgtgtaaactcatcaaagagaatgatgagttctttgagttgatttcctcaact
tttctatctgagaatacttactcaacagctgtgaaggcagcctccgcaaggttgctaatg
aattggttgcttacttggactcatccttatgttttcgatgatgctgttacggagaacttt
aaaaaatgggtcttggaagaggctgtcaagtttcctggtgaacactctggaagcagtgag
gcctcggactctgagatgttgaagacttattctactggacttctcgctcactctctgacg
agtcgtggtcagttagttgaagacgtcttgacatcaggactatctgctaagcttatgcat
tatcttcgagtacgtgttatcggagaggcaagcacaagccgtagagatgcccttcatgca
actgaggctaagcatgtgtccttaaaaacaaaagaagatggtcgaagtagggtgcggagg
gttgtggatacagttgaaggtgaccatgttcttgagggagaatccggtagagagactgat
gtgctgtctgaaggagaactcgaaatcgatggtagagatagatgtaatgttccagctgtt
tttgacggtaaaatgaagcctggagaagacaataccggaagagatgacccttcaagaaat
agactgaaccgatcaaaatctagggcgagaggaaaggtgaacgaaggtgctactaataca
gacagtctcttggcatctcctacatcaggtcgtcttggtgtcagagatagggatcaatca
aaaaatttagatgtcagaaatgcagaagatgggactatatggctggggaaaatgaagtct
ggtataatggagattgaaagagagaagaatgatgagtgctttcaagattgcgtgatagga
accaaaaacataactgatatagtaaagagagcagttggagctgctgaaacggaagctaga
gctgcccatgctcctgatgaagcagttaaagcagccggtgacgctgcagcagagcttgtt
aaaacagctgctttggaggaatttaagtcctctggcagtgaagaagctgccgtggctgct
gctcgtcgagcagctactacagtcatagatgccgctgaggtttcaagaaatcccacctgt
gttacatctgatcagactgcgggtactagtagtgtggaaacagacgcaattgtggatgtt
ggagaagtttcacttccagatattgaatcgttggctcagttacaggaaaagtattgcatc
cagtgcctagagatactgggagaatatgttgaggttctcgggcctgtcctccatgaaaaa
ggtgttgatgtatgcattacgctactggagcgtacgtcccaacttggtgatagcttcaca
ctgtcgcctttgttacctgatgtaatgaagttaatttgcgcgttggctgcacaccggaag
tttgctgcaatgtttgttgaccggggtggcttgcagaagttacttgctgtgccaagggtt
actgagaccttttatggtctctcatcttgcttatacaccataggctctcttcagggtatt
atggagcgtgtctgtgcacttccatcggatctcatacatcaagtggttaaattagctatc
gaacttctagactgttcccaggatcaagccagaaaaaattcagccttattctttgctgct
gcttttgtctttagagccattttagatgcatttgatgctcataatagtttgcagaaactc
cttgcaattcttaaagatgcagcctcagttagaactggtgctaactctgaccgatcaccc
cctgaagtcatgacgtcctcagagaaacagatggcttttcacacctgttttgctttgcgc
caatattttagagctcatctgcttttgcttgtggaatccattcgtccaagcagaagtggc
cgaggtggtgtgccaaaagttccaaatataagggcagcccataagccccttgacattagc
aatgaagctgtggatgccgtattccttcagttacagaaggataggaagttgggtccgacc
tttgtgagaactcagtggcctgctgtcaataattttttggcctcctctggacatgttacc
atgttggaactatgccagactccaccagtagaccgttatctccatgatctacttcagtat
gcttttggtgttcttcacatagttacatcaatacctgatggccgcaaagcaattgtgact
gccacactcagcaacaatcgtgctggcattgctgtcattctggatgcaactaatatttcc
aacagcatagtggaccctgagatcatacagcctgcactaaatgtcctaatcaatctggtg
tgcccaccaccatcattaagcaataagccgcttcttgtccaaaatcatcaacctgttccc
gaccaagccactgcccgtccttcaaccgatgttcctgcagataatgctccgccaactcct
gttgcaccagcgtcttcaggtttggtcggggatcgaagaattttcttaggagcaggaacc
ggttctgctggccttgctgctaagttggagcaggtttatcgtcaagcacgtgaggctgtt
cgtgggaatgatggtataaaaattctcttaaaacttcttcagcccagaatatatgtgaat
ccccctgctaccccagattgtctacgagcgctggcctgcagggtacttcttggtctggct
agagatgatacaattgcacaaatactgactaaacttgaggttggtaggagtttatcagaa
ctaattcgggactcaggtggtcagtcaagtggaacagatcaggtcaggtggcaggctgaa
cttacgcaggtggcccttgagctgatagggatagtgacaaattcagggcatgcgaataca
ctaacagccagtgatgctgctactccaacactgaggcgcattgaaagagctgccattgcc
gcagcaacacctataacatatgattctaaggagcttttgctccttatccatgagcacctc
caggcatcaggtcttggtgaaactgcttcagcactgttgaaagaggctcagttgaatcct
ctaccttccttggctcccccttcttctattgcatattccgctacacaggagatatctgca
ccggtagctcaggtgcagtggccttctggtcgtgctagtggtggatttttcaacagcaaa
cctgaagtctgtgcacacgacgaagatcctaactctagatgtaatgcggctctatctgcc
aagaaaaaacaactggcttcctccacaccggagacgtccacgccagtagcacagcaacaa
tggccctctggtcgtactaacagtggttttttccccagcaaacccaaagtcaatgctcat
gaagaagatcctagttcgagaggtaatgcagctccatccgcaaagaagaaacagttgact
ttctctcccagctttagttcgcagtcacgaaagcaatctttgtcccaggacactcaagct
cagtctatgcagagaataaacagtaattcaaattcagatcctgcttgtgcagatacaaca
gaagctgctgcagaaatagttttgaagaacgaccttgatgccgatgctcaatttaagacc
ccaacttttccgagaaaacggaaattgtctgagctaagagaaacagagatgtcaacctca
agtaaacgaatcaatttgggcgagctaggaccacgaactccagcttgtccaacaacggct
tccttacgtaggaattcaaccattgcggaggcttcaggtttccaaacaccagcttcagct
ttagatgtcaaccaatctggaagctccagactaggccagatgacacctgcttctcagcta
aggcttccaagcgatccccagccgtcggaacggctatcactagactcccttgtagtccag
tatttgaaacaccaacacaggcagtgccgggctcctatcacaactctcccccctgtgtct
ctcctacatccgcatgtctgtcctgaacctaaacggttacttgaagctccactaaacatc
actgaccgtcttggcacccgtgagcttcagagttattacagtggagtccatgggaatcgc
agggaccgtcaattcgttttcagcagattcaaatcctggagatcttaccgagatgagact
gctctcttcacaagcatttcacttcttggtggtactaatcatttagcagtcggtagccat
gctggagaaatcaagatatttgacgctagcagcggtaacatgctagagagtgtctcaggt
caccaggctccggttacacttgttcagtcacatgtctctggtgacactcaactgttgctt
tcttcgagctacagtgatgtgcagttgtgggacgcgtctaatataactgttgggtctaaa
cactcgtttgatggatgcaaggctgcaaagttcagcaactctgggtcacttattgcagcg
ctctctagtgaaggaccaacaaaagatgttcttctgtataacgtagagaccggcagtctt
tccgagaaattcactgacccagacacttcttcccggactagtccttattctcttgtacac
ttcaacccttgcgattcactaatattgtggaatggtcatctctgggatcgccgtatccca
aatagttgcaaacggtttgatcagtttactgattatggtggcggcggttttcatccttct
cgaaatgaggtgatcataaactcggaggtctgggacttgaggaatatgaacacgaggctt
attcggagtgtaccatcattggaccagacagctattacgttcaactccaggggagatgtt
atatacgcaatgctgaggagaaacattgaggacgtgatgtctgctgtcaacacacgccgt
gcgaagcatccgttgtttgctgctttccgcactcttgatgcggtgaactattcagacatt
ggcactataccggtggaccgatgtcttcttgactttgctacagaaccaacagattctttc
cttgggctgatcacaatggaagatcaagatgatatgttttcctcagccaggatgtatgag
attggcagacggagaccaacggatgatgactcggatcccgatgatgatggtgagacggag
gatgaagatgaagatgatgaagacgacgaagatgacctggaccggattcttggactagct
ggagacgatagcgacagtggagatgatgacatgagcagcgatgacaatgaagataacagt
gcgagtgattttgatgatgatgatggaggtatgttctttgatggtgggattatggagatt
gtaagtgacggtgatgatgaagacgatattggtgatagtgatggtgaagacagtgctgat
gatggtgattccattagcagtggcgaagaggattttctcaacagcattcattaa
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integrated database retrieval system
