KEGG   Brassica napus (rape): 106390129
Entry
106390129         CDS       T04128                                 
Name
(RefSeq) DNA-directed RNA polymerases IV and V subunit 2
  KO
K16252  DNA-directed RNA polymerase IV and V subunit 2 [EC:2.7.7.6]
Organism
bna  Brassica napus (rape)
Pathway
bna03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:bna00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    106390129
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:bna03021]
    106390129
Enzymes [BR:bna01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     106390129
Transcription machinery [BR:bna03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol IV and V specific subunits
     106390129
SSDB
Motif
Pfam: RNA_pol_Rpb2_6 RNA_pol_Rpb2_1 RNA_pol_Rpb2_7 RNA_pol_Rpb2_4 RNA_pol_Rpb2_3 RNA_pol_Rpb2_2 RNA_pol_Rpb2_5 CFAP77
Other DBs
NCBI-GeneID: 106390129
NCBI-ProteinID: XP_013685976
UniProt: A0A816TGD8
LinkDB
Position
A5:complement(22215278..22221171)
AA seq 1169 aa
MTDIDIEEIEAAGEIDLRDLGEPFLQSFCKKAATSFFDEYGLVSHQLNSYNFFIDHGLQS
VFESSGEMLVEPSFDPTKNKDHEWRYATVKFGEVSVDKPTLYSDDKELVFLPWHARLQNM
TYSARMKVNVDVEVFVKKVVKRDKFKTGQDEYVEKQILSKKTQDIPIGRIPVMVKSVLCN
TTERGKHVESYRKGECAFDQGGYFVIKGAEKVFIAQEQMCTKRLWISNSPWTVSYRSETK
RNRFIVRLSENQKAEDFKRKEKVLTVYFLSTEIPVWVLFFALGVASDKEAVDLIAFDGGD
ASITNSVVAAIQEADSVCEDFRHGRNALAYVEQQIKGTKFPPGESVDECLSLYLFPGLKS
LKQKARFLGYMVKCLFSAYAGKRKCENRDNFRNKRIELAGELLERELRVHLAHARRTMTK
AMQRHLTGDGDLKPIEHYLDASIITNGLSRAFSTGAWCHPFRKMERVSGVVANLGRANPL
QSLIDLRRTRQQVLYTGKVGDARYPHPSHWGRVCFLSTPDGENCGLVKNLSLLGLVSTQI
MEPVVEKLFDSGMEELVDDTSTPLSGKHKVLLNGDWVGVCSDSDYFVAELKSRRRQSELP
RQMEIKLDKDDKEVRIFTDAGRLLRPLMVVENLHKLKQSKPSKYTFEHLLDQGILELIGI
EEEEDCTTAWGTKQLLKQQKSYTHCELDLSFLLGVSCAIVPFANHDHGRRVLYQSQKHCQ
QAIGFSSTNPNIRCDTLSQQLFYPQKPLFKTMASECLQKDVLFNGQNAIVAVNVHLGFNQ
EDSIVMNKASLERGMFRSEQIRSYKADVDSKDSEKRKKMDEVVQFGKTHSKIGRVDSLDD
DGFPFVGANMHSGDIVIGRCTESGTDHSVKLKHTERGIVQKVVLSSNDDGKNYATVSLRQ
VRSPCLGDKFSSMHGQKGVLGYIEEQENFAFTNQGIVPDIVINPHAFPSRQTPGQLLEAA
LSKGIACPMQKKKGKSDAYSKVTRHATPFSTPSVDDITDQLHRAGFSRSGNERVYNGRTG
EMMRSLIFMGPNFYQRLIHMSEDKVKFRNTGPVHPLTRQPVADRKRFGGIKFGEMERDCL
IAHGASANLHERLFTLSDSSQMHICRNCKSAANVIERVASSGRRIRGPYCRLCESPDYVV
MVNVPYGAKLLYQELFSMGICLNFETNLC
NT seq 3510 nt   +upstreamnt  +downstreamnt
atgaccgatatagacattgaagagattgaggccgctggggaaatcgatttacgcgaccta
ggagagccctttcttcagagcttctgcaagaaagctgcgacgtccttcttcgacgagtac
ggcctcgtcagccaccagctcaactcctacaacttcttcatcgatcacggccttcagagc
gtgtttgagtcctccggtgagatgctcgttgagccgtcctttgaccccacgaagaacaag
gaccatgagtggagatacgcgacggtgaagttcggagaagtcagcgtggataagcctacc
ttatactctgatgataaggagcttgtgtttctcccgtggcacgctaggcttcagaacatg
acctactcggccaggatgaaagttaatgtcgatgttgaggtgttcgttaagaaagttgtt
aaaagagacaagttcaagacgggacaagacgaatatgtggagaagcagatactgtctaag
aagacgcaggacatcccgattggtaggatacctgtgatggtgaagtctgtgctttgcaac
acaacggagagagggaagcatgtggaaagctacagaaagggggagtgtgcatttgaccag
ggtggatactttgtgataaaaggagccgagaaggtctttattgctcaagaacagatgtgc
acaaagagactttggatttctaattcaccatggaccgtctcctacaggtccgaaaccaaa
aggaatcgtttcattgtgcgtctatcagagaatcagaaagctgaagactttaagagaaaa
gagaaagtactgacagtgtactttctgtcaactgagatcccagtctgggtcctcttcttt
gcgctgggtgttgcgtcagacaaagaggctgtagatctaattgctttcgatggtggtgat
gcaagtattaccaacagcgtcgtagctgcgatccaggaagctgattcggtttgcgaagat
tttcgccatgggaggaatgctctggcatatgttgaacagcagataaaaggcacaaaattc
ccacctggtgagagtgtggatgaatgcctaagtctgtacctgtttccaggcctcaagagt
ttgaagcagaaagcacgattcttgggctacatggtgaaatgcctttttagcgcatatgct
gggaaaagaaagtgtgagaacagagacaactttaggaacaagaggatcgaactagctgga
gagctgctggaaagggaactaagggtgcatttggcgcatgctagaagaacaatgaccaaa
gccatgcagagacacctcacgggcgatggcgatctgaagcctatcgagcactacttggat
gcttccattataacaaatggacttagtagagccttctccactggagcatggtgtcatcct
ttcaggaagatggaaagggtttcaggtgttgtcgctaatctgggtcgtgcaaatccactc
cagagtttgattgatctgcggagaacgcggcaacaggtcctgtataccggcaaagttgga
gatgctagatatccgcatccctctcactggggcagagtatgctttttgtcaaccccagat
ggcgaaaattgtggtcttgtgaagaacctgtctctccttggacttgtcagcactcaaatt
atggagcctgtggtggaaaaactcttcgatagtggaatggaagagctggtggacgatacc
agtacaccactgagcgggaagcacaaggttctcctcaatggagactgggttggagtatgt
tcagattctgactactttgttgcggagttgaaaagcaggaggcgtcaaagtgaattacct
cgtcagatggaaattaagctagataaagatgacaaggaggtacggatttttactgacgct
ggcagacttctccgtcccctcatggttgtggaaaatctccacaagttgaagcaaagtaaa
ccatcgaagtacacctttgagcatcttcttgaccaagggattctcgagctgatcgggatt
gaggaagaagaagactgtaccaccgcatggggaaccaagcagcttctgaaacagcagaag
agttacactcactgcgaactggatttgtccttcctgttgggtgtgagctgtgcgattgtg
ccgtttgcgaatcatgatcatggtaggagagttctctaccagtcccagaagcattgccag
caagccattgggttctcctcaacgaaccctaacatccgctgtgataccctgtcccagcag
ctgttctatccccagaagccacttttcaagacaatggcgtcagagtgtcttcagaaggat
gtgttgttcaatggtcagaacgcaattgttgctgtgaatgttcatctcgggttcaaccag
gaggactccattgtgatgaacaaggcttcgctggaacgtggtatgttccgttcagaacag
atcaggagctataaagctgatgttgacagtaaagactcggagaagaggaaaaagatggac
gaggttgttcagtttggaaagacacacagcaagattggcagagtagacagcctagatgat
gacgggttcccctttgttggtgctaatatgcacagtggtgatattgtcattggcagatgc
accgagtctgggactgatcacagcgtgaaactgaagcacactgagagagggatagtgcag
aaggtggttctatcatccaatgacgatgggaagaattatgctactgtttctctgagacag
gttcgttctccatgtcttggagataaattttccagtatgcatggccagaagggtgtttta
ggctatatagaggagcaggagaattttgctttcacgaatcaaggcatagttcctgatatc
gtgatcaacccgcatgcattcccttctcggcaaacaccgggccaactcttggaggctgct
ctctccaaaggaatagcttgtcctatgcaaaagaagaaaggcaagtctgatgcatactcc
aaagtgacacgccatgccactcctttctccactcccagtgtcgatgacataaccgaccag
cttcacagggctggcttttcaagatcgggaaacgaaagggtctacaatggaagaacagga
gagatgatgcgttcactcatcttcatgggcccaaatttctaccagcgactcatccacatg
tcggaggacaaggtcaagttcaggaacaccggaccagttcacccactcacgcgccagcca
gttgcagacaggaagaggttcggcggaatcaagttcggagagatggagcgagactgcctg
attgctcacggtgcatcagcgaacctgcacgagcgtctgttcactctgagtgactcttca
cagatgcacatctgcaggaactgtaaaagcgcagcgaacgtgatcgagagggtggcgagc
agtggaagaaggatcagaggaccgtattgcaggctgtgcgagtctccggactatgtggtg
atggtgaacgtgccgtatggagctaagcttctgtatcaggagctgttcagtatgggcatc
tgtctcaacttcgaaaccaacctctgctga

DBGET integrated database retrieval system