Brassica napus (rape): 106390149
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Entry
106390149 CDS
T04128
Name
(RefSeq) U4/U6 small nuclear ribonucleoprotein Prp31 homolog
KO
K12844
U4/U6 small nuclear ribonucleoprotein PRP31
Organism
bna
Brassica napus (rape)
Pathway
bna03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
106390149
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
bna03041
]
106390149
Spliceosome [BR:
bna03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
106390149
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Gene cluster
GFIT
Motif
Pfam:
Nop
Prp31_C
Motif
Other DBs
NCBI-GeneID:
106390149
NCBI-ProteinID:
XP_048610431
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Position
C4:complement(22594226..22596909)
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AA seq
485 aa
AA seq
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MATLEDSFLADLDDLSDNEAEVDESDGDDGKDKEDIDMDMADLETLNYDDLDSVSKLQKS
QRYLDIMQKVEEALGKDSDGAEKGTVLEDDPEYKLIVDCNQLSVDIENEIAIVHNFIRDK
YRLKFQELESLVNHPIDYARVVKKIGNETDLTRVDLEGLLPSAIIMVVSVTALTTKGSPL
PEEVLQKTLEACDRALDLDSARKKVLDFVESKMGSIAPNLSAIVGSAVAAKLMGTAGGLS
ALAKMPACNVQVLGQKRKNLAGFSSATSQSRVGYLDQTEIFQSTPPALRMRAGRILAAKS
TLAARVDATRGDPSGTNGKALREEIRKKIEKWQEPPPARQPKPLPVPDSEPKKRRGGRRL
RKMKERYAVTDMRKLANRMAFGTPEESSLGDGLGEGYGMLGQAGSNRLRISSVPSKLKIN
PTIAKKLKERNYAGGATTSGLTSSLAFTPVQGIELCNPQQALGLGSGTQSTYFSESGTFS
KLKKI
NT seq
1458 nt
NT seq
+upstream
nt +downstream
nt
atggcgactcttgaagattctttcctcgcagaccttgatgacttatctgacaatgaagca
gaagtggatgagtctgatggtgatgatggaaaggataaagaagatattgacatggacatg
gcagacttagaaacccttaactacgatgatctcgattccgtttctaagctccagaaatcg
cagagatatcttgacattatgcagaaagtggaagaggctctgggaaaggattctgatgga
gctgagaaaggaactgtgctagaagatgatcctgaatacaagctaatcgtggattgcaac
cagctctcagttgacattgagaatgagattgccatcgtccacaacttcatccgtgacaag
tacagactcaagtttcaagagcttgaatcgctggtaaaccaccctattgattatgcccgc
gttgtcaaaaaaatagggaatgagacggatttaacacgtgttgatcttgaaggccttctt
ccatctgctattatcatggttgtttcagttactgccttaaccactaaagggagcccactg
ccagaggaggtcctgcagaagactctagaggcttgtgatcgagctctagatcttgattcc
gcaaggaagaaggttctcgactttgttgagagtaagatggggtctatcgcaccaaatctg
tccgccattgtcgggagtgcggttgcagctaagctcatggggactgctggaggtttgtca
gcgcttgctaaaatgcctgcctgtaatgttcaagttcttggccaaaagaggaagaacctt
gctgggttctctagtgcaacctcgcagtcccgcgtgggttatctggatcagaccgagatt
ttccaaagcacgcctcctgcgcttcggatgcgtgctggcaggatcttggctgcaaagtct
actttggcagcaagagttgatgctactaggggagacccatcaggaacaaatggaaaagct
ttgagggaagagatccgtaagaagattgagaagtggcaagaacctcctcctgcaaggcag
cctaagccacttcctgttcctgattccgagcctaaaaagagaagaggtggtcgccgtcta
aggaaaatgaaagaaaggtatgcagtgacagacatgaggaagcttgccaacaggatggcg
tttggtacacccgaagagagctctcttggtgatggattaggtgaaggatatggaatgctt
ggccaggctgggagcaacaggctgcgtatatccagtgttcccagcaagctaaagattaat
cctaccatcgccaaaaagctgaaagaaagaaattatgcaggtggtgccactacctctggt
ttgacttcgagtctggcttttactcctgtgcagggaatagagctgtgcaatcctcaacag
gctttaggattaggcagtgggactcaaagtacttacttctcagagtcggggaccttctct
aagctcaagaagatataa
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