Brassica napus (rape): 106390187
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Entry
106390187 CDS
T04128
Name
(RefSeq) syntaxin-61 isoform X1
KO
K08500
syntaxin of plants SYP6
Organism
bna
Brassica napus (rape)
Pathway
bna04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
106390187
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
bna04131
]
106390187
Membrane trafficking [BR:
bna04131
]
SNARE
SNAP-25[C] (Qc)
STX6
106390187
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Gene cluster
GFIT
Motif
Pfam:
STX6_10_61_N
SNARE
MCU
PDCD10_N
Malic_M
YqbF_HeH
CCDC-167
Motif
Other DBs
NCBI-GeneID:
106390187
NCBI-ProteinID:
XP_013686051
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All DBs
Position
C7:complement(21677965..21679748)
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AA seq
245 aa
AA seq
DB search
MSSAQDPFYIVKEEIQDSIDKLQSAFHKWERISPGMGDQVHVTKELLANCGSIEWQVDEL
EKAVNVAAKDPALYGIDEAELERRRRWTSNARTQVRNVKTGVLAGKGSAGAGNASEVRRE
LMRMPNSSEASRYDQYGGRDDDGFVQSESDRQMLLIKQQDEELDELSKSVERIGGVGLTI
HDELVAQERIIDELGTEMDSTKNRLHFVQKKVGMVMKKAGAKGQMMMICFLLVLFIILFV
LVFLT
NT seq
738 nt
NT seq
+upstream
nt +downstream
nt
atgtcttcagcgcaagatcctttctacattgttaaagaagagattcaggattctattgat
aagctgcaatctgcattccacaaatgggagcgtatctctccaggcatgggggatcaagtt
catgtcaccaaggagcttcttgctaactgtggaagcattgagtggcaggtagatgagctg
gaaaaagcggttaacgtagcagcaaaagatcctgccttgtatggaattgatgaagctgag
cttgaaagacggaggagatggactagtaacgctaggacacaggtgcggaatgtgaagact
ggtgtgctagctggtaagggtagtgctggagctggcaatgcaagtgaagtgcggagagag
ctaatgagaatgccaaactcgagtgaagcaagtagatacgatcagtatggaggaagagac
gatgacggttttgtgcagtcagagtcagataggcaaatgctgttgataaagcagcaagac
gaagagttggacgagctgagtaaaagtgtagagagaattggaggagtggggcttactata
catgatgaactcgttgcacaggagagaataatagatgaactgggtacggagatggacagt
acaaagaacaggctacactttgtacagaaaaaagtggggatggtgatgaagaaagcagga
gcgaaagggcagatgatgatgatatgtttcttgctcgtcttgttcatcatcctcttcgtt
ctcgtcttcttgacctaa
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