KEGG   Brassica napus (rape): 106390209
Entry
106390209         CDS       T04128                                 
Name
(RefSeq) polygalacturonase
  KO
K01184  polygalacturonase [EC:3.2.1.15]
Organism
bna  Brassica napus (rape)
Pathway
bna00040  Pentose and glucuronate interconversions
bna01100  Metabolic pathways
Module
bna_M00081  Pectin degradation
Brite
KEGG Orthology (KO) [BR:bna00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00040 Pentose and glucuronate interconversions
    106390209
Enzymes [BR:bna01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.1  Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
    3.2.1.15  endo-polygalacturonase
     106390209
SSDB
Motif
Pfam: Glyco_hydro_28 Pect-lyase_RHGA_epim NosD Nab2-zf4
Other DBs
NCBI-GeneID: 106390209
NCBI-ProteinID: XP_013686078
UniProt: A0A078FZT4
LinkDB
Position
C4:3875106..3876502
AA seq 367 aa
MTTFNVQLYGARGDGKTDSTKPFLTAWTLACGSEAQSMVYIPRGTYLVRNLVFWGPCKNI
ITFKIDGKLVAPKNYWSIGNSGYWILFAKVNRILVYGGTIDAKGAGYWSCRKKGGHCPQG
ARSISFSWCNNVLLSGLTSLNSQNLHVTVHHSSNVRIQNIRIRAPSRSPNTDGIIVQSSS
GVTISGAVIGTGDDCIALNQGSVNIYIERVLCGPGHGISIGSLGDHADEEGVNNVTVTNS
VFTKTRNGVRIKSWARPSTGFVRNVEFRNLVMRNVGNPLIIDQNYCPSGKGCPNQSSGVK
ISGVTFANIKGTSTTPIAMKLDCSGSHHCTEITLKNIKLTYMKGATTSYCKNAHGGASGV
VVPMNCM
NT seq 1104 nt   +upstreamnt  +downstreamnt
atgactacgtttaacgtacaattatatggagctagaggtgatgggaaaacagactcgacc
aagccatttttgacggcttggacattagcatgcggctcagaggctcaatccatggtctac
attccccgtggaacatacctggtacgaaatcttgtcttttggggtccttgcaagaacata
ataactttcaaaatcgatggaaaactcgtggctccaaaaaactactggagtataggtaat
tctggttattggatcctattcgctaaggtaaaccggatattggtttacggtggaacgatt
gatgctaaaggagctggttattggtcttgtagaaagaaaggtggccactgtcctcaaggt
gcaagatctatatcgtttagctggtgcaataatgttctactaagtggccttacgtcgttg
aatagccagaatctgcatgtcacggttcatcattcttctaacgttcggattcagaacata
agaattagggcgccgagtagaagccctaacactgatggtattatcgtccagtcttcttct
ggggtcaccattagtggggcagtcattggaactggggatgactgcattgctcttaatcaa
ggatctgtgaacatttatatcgaacgtgtgctgtgtggaccaggacatggaatcagcatt
gggagtcttggggatcacgctgatgaggaaggtgtcaataatgtaaccgtcacgaactct
gttttcaccaagacgcgaaacggtgtaagaataaagagttgggctaggccgagcacaggg
tttgtgagaaatgtggagtttcgaaacctggtaatgaggaatgttggtaacccgctaatc
atcgatcaaaactattgccctagtggaaaaggctgccctaatcagagctctggtgtgaag
ataagtggagtgacttttgcaaacataaagggaacatcaacgacaccaatagctatgaaa
ctggattgtagtggaagccatcattgcacagagattacattgaaaaacattaagctcact
tacatgaaaggagcaacaacttcttactgcaagaacgctcatggaggagcctctggagtt
gtggtaccaatgaattgtatgtga

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