Brassica napus (rape): 106390223
Help
Entry
106390223 CDS
T04128
Name
(RefSeq) F-box protein SKP2A
KO
K03875
F-box and leucine-rich repeat protein 1 (S-phase kinase-associated protein 2)
Organism
bna
Brassica napus (rape)
Pathway
bna04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
106390223
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
bna04121
]
106390223
Ubiquitin system [BR:
bna04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
106390223
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_6
LRR_4
F-box-like
LRR_At5g56370
F-box
LRR_NXF1-5
LRR_At1g61320_AtMIF1
LRR_8
Motif
Other DBs
NCBI-GeneID:
106390223
NCBI-ProteinID:
XP_013686096
UniProt:
A0A078JKC8
LinkDB
All DBs
Position
C8:30479926..30485724
Genome browser
AA seq
362 aa
AA seq
DB search
MVMVVGETSMELDQCFQMMMMKMEGVSIKEWKDIPVELLLRILSLVDDRNVIAASGVCCG
WRDAISLGLTRLRLSWCNNNMNSLVLSLAPKFIKLQTLILRQDKPQLEDNAVEAIANHCH
ELQELDLSKSLRLTDRSLYALAHGCPNLTKLNLSACTSFSDKAIAYLTTFCRNLKVLNLC
GCVNAVSDYTLEAIGNNCNQMQSLNLGWCEKISDDGVMSLAYGCPDLRTLDLCGCVLITD
ESVVALADWCVHLRSLGLYYCRNITDRAMYSLAQSGVKNKPGGQWKSSAKKSKFDEEGLR
SLNISQCTALTPSAVQAVCDTFPALHTCSGRHSLVMSGCLNLTSVHCACILQAHRSVPHS
AH
NT seq
1089 nt
NT seq
+upstream
nt +downstream
nt
atggtgatggtagtaggagaaacatccatggagcttgaccagtgttttcagatgatgatg
atgaagatggaaggagtctcgatcaaagagtggaaagatatccctgttgagcttctcttg
agaatcctctctcttgttgatgatcggaatgtcattgctgcttctggtgtttgctgtggc
tggagagatgccatctcgcttggcctcactcgtctccggctctcttggtgcaacaacaac
atgaacagcttggttctttctcttgctccaaagtttataaagctgcagactttaatactg
cgccaagacaaacctcagctagaggacaatgcggtggaggccatagcaaatcactgccat
gagctgcaagagcttgatctcagcaaaagcctgagactcactgaccgttccctctacgca
cttgctcatggctgccctaacctcacaaaactcaaccttagcgcttgcacttcgttcagc
gacaaagctattgcgtatctgaccacgttctgcagaaacctgaaggttctaaatctttgt
ggatgtgttaacgctgtttctgactataccttggaggctattgggaacaactgcaatcag
atgcagtcactaaacttgggatggtgtgagaagatcagtgatgatggggttatgagttta
gcttatggctgtccagatctcaggaccctggacttgtgtggttgtgttctcattacagat
gagagtgtggtagctttagctgattggtgcgtccacttgagatcactggggctatactac
tgcagaaacataacggacagagccatgtactcgctagctcaaagcggggtgaagaacaaa
ccaggggggcaatggaaatcatcggccaagaagagcaaattcgacgaagaagggctgaga
agtctcaacataagccaatgcactgcacttacaccttcggctgttcaagcggtttgcgat
acgtttcctgctcttcacacgtgttcggggagacattcgcttgtgatgagcgggtgtttg
aacttgacgtctgtgcactgtgcttgtatccttcaggctcatcgctcggttcctcactcg
gctcactga
DBGET
integrated database retrieval system