Brassica napus (rape): 106390281
Help
Entry
106390281 CDS
T04128
Name
(RefSeq) autophagy-related protein 13b-like
KO
K08331
autophagy-related protein 13
Organism
bna
Brassica napus (rape)
Pathway
bna04136
Autophagy - other
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09140 Cellular Processes
09141 Transport and catabolism
04136 Autophagy - other
106390281
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
bna04131
]
106390281
03029 Mitochondrial biogenesis [BR:
bna03029
]
106390281
Membrane trafficking [BR:
bna04131
]
Autophagy
Autophagosome formation proteins
ULK complex
106390281
Atg1 complex
106390281
Mitochondrial biogenesis [BR:
bna03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
106390281
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATG13
Motif
Other DBs
NCBI-GeneID:
106390281
NCBI-ProteinID:
XP_013686163
LinkDB
All DBs
Position
C1:41491174..41493819
Genome browser
AA seq
592 aa
AA seq
DB search
MNRSSSNSEGAKAEQIIFEFFAKSLHIILESRTPFMSSRNFSGDQMICSPSPSSSSSSSS
SVRPRDKWFNLALRECPAALESFDIGRRSSLEPLVVDVVLVARQPFVGDQMSLSDQDELA
CETKNEQVIERWLVQYDNRKVREASASRSSSSNSKLQVMYKKATLLLRSLFVMVRLLPAY
KIFRALNSSGQICKFKLVPKVPTIVEPFTRREEAEMQKFAFAPVDTVCGRLCMSVLYRSL
SDVSCEHSAPVSPTFITDYVGSPLADPLKRFPSLPLSYGSPPLLAFQRRHSWSFDRFKAS
SPPPSVSCSPSPTRSDSQALVRRLPDIPTGRRKDEEGDFSPPCSPSGPVSRGITRTESAP
VRIPAPSFESKQNLVAPSPRLKLLRQASLKPVRNSGGAVESGAGLEKLFLYGREEFRRSA
GVRLSTNSSPRISFSRSSSRSYQEDFDDNDFPCPFDVEYDEITDPSSRPGSFDQRGDIHE
PPLESSGSYPKKSQDAAVGALVNMLKKAPPLRQDVSETSIPEIYWNNNKKPAGAHDVAAA
SMTASGIALAAKTTADALEELRSYKEMKNVLLSQSTMGSSSVTTSPFAVSGS
NT seq
1779 nt
NT seq
+upstream
nt +downstream
nt
atgaacaggagtagcagcaattcagaaggtgctaaagcagagcagatcatattcgagttc
ttcgccaaaagcctccacataatcctcgaatcaaggactcctttcatgtcttcaagaaac
ttcagcggtgaccagatgatctgctccccttccccttcctcctcctcttcatcttcctct
agcgtcaggcctcgcgacaaatggttcaacctagccctcagagaatgccctgcagcctta
gagagtttcgacatcggccgcagaagcagcctcgagcctctggtcgtcgatgtagttctt
gtagcgagacaaccatttgttggtgatcaaatgagtttgtcagatcaagatgagttagcg
tgcgagacaaagaacgagcaagtgatagagaggtggttggtgcagtacgataacagaaag
gttagggaagcttctgcttctcggtcgagtagtagtaacagtaagttgcaagtgatgtat
aagaaagcaactctgcttctgagatcactctttgtgatggttaggctcttacctgcttac
aagatcttccgagcgctcaactcctccggacagatctgcaagtttaagctcgtccctaag
gtccccaccattgtcgagccgttcactcgcagagaagaggcggagatgcagaagttcgct
ttcgctccggttgacaccgtctgcggtaggctttgcatgtcggtgttgtatcgttctctc
tctgacgtgagctgtgaacactcggctcctgtctctccgacgtttataacggattacgtt
gggagtcctttggctgatccgttgaagaggttcccttctctgcctctttcttacggttcg
cctccgttgctggcgtttcagaggcggcatagctggagtttcgataggttcaaggcctcc
tctcctccgccttcggtttcttgctcgccgtctcctacacggtcggattcgcaagcgttg
gttcgtcgccttcctgatatacctactggtcgtaggaaggatgaagagggagatttctcc
cctccttgctctccttcaggacctgtctcgagaggcatcacgcgtactgagagtgctcct
gtgagaatcccggctcctagttttgagtccaagcaaaacttggtggcgccttctcctcgt
ttgaaactgttgagacaagcttctttgaagcctgtgaggaacagtggtggtgctgttgaa
tctggagcaggattggagaagctgtttctttatgggagagaagaatttaggaggagcgct
ggagtgaggctatctactaacagctcaccgaggatatcgttttctcgaagttccagtaga
tcataccaagaagattttgatgataatgacttcccttgcccgtttgatgttgagtatgac
gagattactgatcctagcagcagaccagggtctttcgaccagagaggagatatacatgaa
ccaccactagagtcgagcggctcctacccaaagaagtcacaagatgctgcagttggtgct
cttgtgaatatgctgaagaaagctccgcctcttaggcaagacgtctctgaaacttccata
cctgagatttactggaacaacaacaagaaacctgcaggggctcacgatgtggcagcggcg
tctatgacagcgtcggggattgctctggcggcaaagacaacagcggatgcgttggaagag
ttgaggtcgtacaaggaaatgaagaatgtgttgcttagccaatccacaatgggttcttcc
tcagttactacttcaccctttgctgtttcaggatcttaa
DBGET
integrated database retrieval system
