Brassica napus (rape): 106390333
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Entry
106390333 CDS
T04128
Name
(RefSeq) small RNA degrading nuclease 3 isoform X1
KO
K14570
RNA exonuclease [EC:3.1.-.-]
Organism
bna
Brassica napus (rape)
Pathway
bna03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
106390333
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
bna03009
]
106390333
Ribosome biogenesis [BR:
bna03009
]
Eukaryotic type
Pre-60S particles
RNases
106390333
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
DNA_pol_A_exo1
Motif
Other DBs
NCBI-GeneID:
106390333
NCBI-ProteinID:
XP_013686230
LinkDB
All DBs
Position
C7:28941950..28947522
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AA seq
533 aa
AA seq
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MEHKLATAEKKVLVELVKLVQKKGLEGEKGGWKEFLNSYDKRFGASLSDPSRRSNDVLVA
FLLSFDKEEDRQLLARVLQCDANRNLIEKFKQESPDKETPEQRLVRMTITHPRYPIYYAF
PSHAEDWFVTKSGKKQSKVIKSTRMLAIDCEMVTCEDGSEAVVRVAAVDRDLKVVLDKFV
KPSLPVIDYKTEITGVTAEDLEKATLSVADIQKKLRRFLSKGTILVGHGLHNDLQVLKVD
HARVIDTSLVFKYSGANNSRTPSLLNLCKSVLDEELRMEGAAHNCVHDAAAAMKLVLAVV
EKGVETSIPQTEKMLEVEKTIQEAKKASLYLHKIPRNVPSQELKGVITGDFKVEVKPPKK
LGGYYSAEVVFSSQDEANQAFDNVDGDIVKDKMGLSQKMVEFQPSSGSVSRLYVRKNVQD
AEVSAKKRSNTEEIKVSSKRRKRENDAKETREENVNHCSSRKSKCENHIKEIEELKENHI
KETEELKENHIKETEELKEKLKANELKLKAKELKLKAKEREVEAMVAEYEANH
NT seq
1602 nt
NT seq
+upstream
nt +downstream
nt
atggaacataaactagccactgctgagaagaaggtgctggtagagctggtgaagctagtg
cagaagaaaggtttagaaggagagaagggaggatggaaggagtttctaaactcttacgac
aagagattcggagcgagtctcagcgatccttcgcgacgctccaatgatgtattggtcgct
tttcttttgagttttgacaaggaggaagataggcagctattggctagggttcttcagtgt
gatgctaatcgtaatctgattgagaaattcaagcaggaatcccctgataaagagactcct
gagcagaggctagttcgaatgactattacgcatcctaggtaccctatctactatgctttc
ccttcccacgccgaggattggtttgtaactaagtctggcaagaagcagtcaaaagtgatc
aagtcaaccagaatgcttgctattgattgtgagatggttacctgtgaagatggcagtgag
gctgttgtcagggttgctgctgtggaccgtgatttaaaggtggttcttgacaaatttgtg
aaaccgagcctacccgttattgactataagacggaaatcactggagttactgctgaggat
cttgagaaagccactctgtctgttgctgatattcagaaaaaactgcggaggtttctttct
aagggaactattttagttggtcacggtttgcacaatgatcttcaagtgttgaaggtagat
catgcgagagtaatcgatacctctcttgtcttcaagtattccggtgcaaacaattctcga
acaccttctttgttaaatctatgcaagtctgttttggatgaggaactgcgaatggagggt
gctgctcacaattgcgttcacgacgctgccgctgctatgaagcttgtacttgctgttgtg
gagaaaggagtagagacctcgatcccacaaactgaaaaaatgttggaggttgagaagaca
atacaggaggcgaagaaggcaagtctctatcttcataagatccctcgtaatgtcccttct
caagagttaaaaggagttattacgggagatttcaaagtcgaggttaagccaccaaagaag
ctaggaggttattatagcgcagaagttgtttttagtagtcaagacgaagcaaatcaagca
tttgataacgttgatggagatatagtcaaggataaaatgggtttgtcacaaaaaatggtt
gagtttcaaccgagttctggatcagtatccagactatacgttcgtaaaaatgttcaagac
gctgaagtctctgccaagaagagaagtaacacagaggagatcaaagtgagttctaagagg
cggaagagggagaatgatgctaaggagacaagagaagagaatgtaaaccattgcagcagc
cgaaagagcaaatgtgaaaatcatataaaggaaattgaagaactgaaggagaatcatata
aaggaaaccgaagaactgaaggagaatcatataaaggaaactgaagaactgaaggagaag
ctcaaagctaatgaactgaagctcaaagctaaagaactgaagctcaaagctaaggaacgt
gaggttgaggctatggttgcagagtacgaagcgaatcactaa
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