Brassica napus (rape): 106390440
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Entry
106390440 CDS
T04128
Name
(RefSeq) LOW QUALITY PROTEIN: putative cyclic nucleotide-gated ion channel 15
KO
K05391
cyclic nucleotide gated channel, plant
Organism
bna
Brassica napus (rape)
Pathway
bna04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
106390440
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
bna04040
]
106390440
Ion channels [BR:
bna04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
106390440
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Paralog
GFIT
Motif
Pfam:
Ion_trans
cNMP_binding
IQ
Motif
Other DBs
NCBI-GeneID:
106390440
NCBI-ProteinID:
XP_022556313
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Position
C4:20314..23887
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AA seq
684 aa
AA seq
DB search
MGYGNSRSVRFEEDSEVTKPQAVHEETAEKLKFKINGAQISPRKNVKKMTRGKSFKAKVL
SRVFTEDLGRVKNKILDPRGQTIRRWNKLFLIACLVSLFVDPLFFFLPVMRKEACITIGI
RLEVVLTVIRSLADAFYIAQIVIRFRTAYIAPSSRVFGRGELVIDSRKIAWRYLNKSFWI
HLVAALPLPQVLIWIVIPNLRGSPMTNTKNTLRFIIIFQYVPRMFLIFPLSRQIIKATGV
VTETAWAGAAYNLMLYMLASHVLGACWYLLAVERQEACWRHACNIEKPICQYRFFECRRL
EDPQRNSWFEWSNITTICKPGTRFYEFGIYGDAVTSTVTSSNFINKYFYCLWWGLKNLSS
LGQNLSTSTYVGEIIFAVVMASLGLVLFALLIGNMQTYLQSTTMRLEEWRIRRTDTEQWM
HHRQLPPELRQAVRKYDQYKWLATRGVDEEALLISLPLDLRRDIKRHLCFDLVRRVPLFD
QMDERMLDAISERLKPALCTEGTFLVREGDPVNEMLFIIRGHLDSYTTNGGRTGFFNSCL
IGPGDFCGEELLTWALDPRPVVILPSSTRTVKAIYEVEAFALRADDLMFVATQFRRLHSK
QLKHKFRFYSHQWRTWAACFIQAAWRRHKKRKYATELRVKEEFQCMFETASMVRLNSGKF
TRSGSDSGMVSSIQKPVEPDFSRE
NT seq
2055 nt
NT seq
+upstream
nt +downstream
nt
atgggttatggtaactcaagatctgtgagatttgaagaagattcagaagtaacaaagcca
caagctgtacatgaagaaactgcggaaaagctcaagttcaaaatcaatggagctcaaatc
tctcctagaaaaaatgtaaagaagatgactagagggaagtcttttaaagctaaagtactc
tccagagtgttcactgaggatcttgggagagttaaaaacaaaatcctcgatcctcgtgga
caaacaataagaagatggaacaagctctttctcatagcatgtttggtttctctgttcgtg
gatcctctgtttttcttcttaccggtcatgagaaaagaggcttgtatcacaattggaatc
agactcgaagttgttctcacggttattagatctttggctgatgctttctacatcgctcag
attgttatacggtttagaacggcttacatcgccccatcttctcgtgtattcggtagagga
gagcttgtgattgattcaagaaagattgcttggagatatctcaacaaaagcttctggatt
catttggttgctgctttgcctttacctcaggtgttgatttggatagtaatcccaaatcta
agaggctcaccaatgacaaacaccaagaacactcttagattcatcatcatattccagtat
gttccaaggatgttccttatattccctctctctcgccagatcattaaagccactggtgtt
gtaactgagactgcttgggcaggagctgcctacaacctcatgctatatatgctagcaagc
catgttttaggcgcttgttggtacttgcttgcagtagagaggcaagaggcttgctggaga
cacgcttgcaacatcgagaaaccgatatgtcaatacagattcttcgagtgcagaaggctt
gaagatcctcaaaggaactcgtggttcgagtggagcaacataacaactatatgcaaacct
ggaactaggttttacgagtttggtatatacggagatgcagtaacttcgactgttacttcg
tcaaacttcataaacaagtacttttactgtctctggtggggactgaagaacctcagttcc
ttgggacaaaatctatccacgagcacttacgttggcgagattatcttcgctgttgtcatg
gcgtctctaggacttgttctctttgccttgcttattggaaatatgcaaacatatttacag
tcgacaaccatgagacttgaagaatggaggataaggaggacagatacagagcaatggatg
caccataggcagcttcctccagagctaagacaagccgtgagaaaatatgatcaatacaag
tggttagctacacgaggagtcgatgaagaagctttattgataagtcttcctcttgatctc
cgaagagatatcaaacgccatctatgttttgatcttgttcgacgtgttccgctgttcgat
caaatggacgaaagaatgcttgacgcgatcagcgagaggctaaaaccggctttatgcact
gaaggtacgtttcttgtgagagaaggcgacccagttaacgaaatgctcttcataatcaga
ggccatcttgattcttacacaacaaatggaggcagaaccgggttcttcaactcttgtctc
ataggaccaggagatttctgcggcgaggagttgcttacttgggcgttagatcctcgcccc
gttgtgatcttaccgtcttccacacgcaccgtcaaagccatttacgaggttgaagccttt
gctttgagagctgatgatttgatgttcgtggctacacagtttaggagattacatagtaag
cagttgaaacataagtttaggttttactctcatcaatggagaacttgggcggcttgtttc
atacaggctgcttggagacggcacaagaagaggaagtatgcgactgagctgagggttaaa
gaggagtttcaatgtatgtttgagacggcctcgatggttaggctaaacagtgggaagttt
actcgtagtgggtcggattctggtatggtatcttcgattcagaaaccagtagaaccggat
ttttctagggaatga
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