Brassica napus (rape): 106390458
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Entry
106390458 CDS
T04128
Name
(RefSeq) chaperonin CPN60-like 2, mitochondrial
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
bna
Brassica napus (rape)
Pathway
bna03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
106390458
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bna03019
]
106390458
03110 Chaperones and folding catalysts [BR:
bna03110
]
106390458
03029 Mitochondrial biogenesis [BR:
bna03029
]
106390458
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
bna04147
]
106390458
Enzymes [BR:
bna01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
106390458
Messenger RNA biogenesis [BR:
bna03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
106390458
Chaperones and folding catalysts [BR:
bna03110
]
Heat shock proteins
HSP60 / Chaperonin
106390458
Mitochondrial biogenesis [BR:
bna03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
106390458
Exosome [BR:
bna04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
106390458
Exosomal proteins of other body fluids (saliva and urine)
106390458
Exosomal proteins of breast cancer cells
106390458
Exosomal proteins of colorectal cancer cells
106390458
Exosomal proteins of bladder cancer cells
106390458
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-GeneID:
106390458
NCBI-ProteinID:
XP_013686379
UniProt:
A0A816VVV9
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All DBs
Position
A3:complement(17455174..17458730)
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AA seq
572 aa
AA seq
DB search
MYRVLSKLSSSIGSSTSRKLVSGRIISSRNYVAKDISFGVGARAAMLQGVSEVAEAVKVT
MGPKGRNVIIESSYGAPKITKDGVTVAKSISFESNAKNMGAELVKQVANATNKVAGDGTT
CATVLTQAILTEGCKSVAAGVNVMDLRSGINMAIDAVVSDLKSRAVMISTPEEITQVATI
SANGEREIGELIARAMEKVGKEGVITVADGNTLENELEVVEGMKLARGYISPYFITDEKT
QKCELENPIILIHEKKVSDMNSLLKVLEAAVKSSRPLLVVAEDVESDALAMLILNKHHAG
LKVCAIKAPGFGDNRKASLDDLAVLTGAEVISEERGLTLDKIRPELLGTAKKVTISRDDT
LILHGGGDKKLIEERCEELRSANEKSTSTFDKEKTQERLSKLSGGVAVFKVGGASEAEVG
ERKDRVTDALNATRAAVEEGIVPGGGVALLYATKALDNLETQNEDQRRGVQIVQNALKAP
ALTIAANAGYDGSLVVGKLLEQDDCNFGFDASKGSYVDMVKAGIIDPVKVIKTALTDAAS
VSLLLTTTEASVLVKAEEKTQKHVPDMAGMGM
NT seq
1719 nt
NT seq
+upstream
nt +downstream
nt
atgtacagagtgctgtcaaagttatcttcttcaattggctcctctacttcccggaaactg
gtttctggaaggataataagcagcagaaactatgtggctaaggacatcagttttggggtt
ggggctcgtgcagctatgttgcaaggtgtatccgaggttgctgaagctgtcaaggtcact
atgggcccaaagggaaggaatgtgataattgagagcagctatggcgcaccaaagatcaca
aaggatggtgtcaccgtcgccaaaagcatttcatttgagtcaaatgctaagaacatgggt
gctgagctcgttaaacaggtcgctaatgccactaacaaggttgctggagatggaaccact
tgtgcgactgttttgactcaggcgatactcaccgaaggttgcaagtcggtggctgctggt
gtgaatgtgatggatctgcgtagtggcataaacatggctattgatgctgttgtctctgat
ttgaaaagcagagctgttatgatcagcaccccagaagagatcacacaggttgctactata
tctgcaaacggagagcgtgagattggggaattaattgcaagagccatggagaaagttgga
aaggaaggagttatcactgtcgctgatgggaacacgttagagaacgagctagaagtagtg
gaaggaatgaagctagccagaggttacatctctccttacttcatcacagatgaaaagact
cagaaatgcgagcttgagaatcccatcatcctcatccacgagaagaaggtttcagacatg
aactcgctgttgaaagttctagaggcagctgtgaagagcagcaggccacttcttgttgta
gcagaagatgtagagagtgatgcattagctatgcttattctcaacaagcatcatgctggg
cttaaggtttgcgctatcaaggctccaggttttggtgacaacaggaaagcaagcttagat
gatcttgcagttcttactggtgcagaggttatctccgaggagcgtggtctaactcttgac
aaaattcgtcctgaattgcttggaactgcaaagaaggtcactatctctcgtgatgatact
ctcatcctccacggtggtggcgacaagaagctgatagaagaaagatgtgaagagttaagg
tcagcgaacgagaagagcacatccacatttgataaagagaaaacgcaagaacgactctca
aaactatcaggtggtgttgcagtcttcaaggtgggaggagcaagtgaagctgaagttgga
gaaagaaaagacagagtcactgatgctttgaatgctacaagagcagccgtagaagaaggc
atcgtacctggtggtggtgtggctctgttatacgctacaaaggctttagacaaccttgaa
actcaaaacgaggatcaaagaagaggtgttcagatagttcagaatgctctcaaggctcct
gcattgacaatagctgcaaatgctggttacgatggttctttagtggttggcaaattatta
gagcaagacgattgcaacttcggtttcgatgcttctaaaggttcgtatgttgatatggtg
aaagctggaatcatagacccggttaaggttatcaaaaccgccttaaccgatgctgctagc
gtttctttgctattgacaacaacagaggcatcagtgcttgtgaaggcagaggagaaaact
cagaagcatgtccctgatatggctggcatgggcatgtga
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