Brassica napus (rape): 106390503
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Entry
106390503 CDS
T04128
Name
(RefSeq) long chain acyl-CoA synthetase 9, chloroplastic
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
bna
Brassica napus (rape)
Pathway
bna00061
Fatty acid biosynthesis
bna00071
Fatty acid degradation
bna01100
Metabolic pathways
bna01212
Fatty acid metabolism
bna04146
Peroxisome
Module
bna_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
106390503
00071 Fatty acid degradation
106390503
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
106390503
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
bna01004
]
106390503
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
bna04147
]
106390503
Enzymes [BR:
bna01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
106390503
Lipid biosynthesis proteins [BR:
bna01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
106390503
Exosome [BR:
bna04147
]
Exosomal proteins
Exosomal proteins of breast milk
106390503
Exosomal proteins of breast cancer cells
106390503
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-GeneID:
106390503
NCBI-ProteinID:
XP_013686440
UniProt:
A0A816QDZ2
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Position
C6:32285364..32288860
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AA seq
693 aa
AA seq
DB search
MIPYAAGVIVPLALTLLVRNAKKDKKRGVVVDDVGGEPGHTVRNHRFKDPVSSHWEDIST
LPELFEISCKSHSDRFFLGTRRLIAREVETSEDGKVFEKLHLGDYEWKTFGETLEAVCSF
ASGLVQIGHKSEERVAIFADTREEWFIALQGCFRRNVTVVTIYSSLGEEALCHSLNETEV
TTVICGNKELKKLMDISQQLETVKRVICMDDEFPSEASSTWTTTSLADVQKLGRESPVDP
SFPLSADVAVIMYTSGSTGLPKGVMMTHGNVLATVSAVMTIVPDLGKRDTYMAYLPLAHI
LELAAESVMATIGSAIGYGSPLTLTDTSNKIKKGTKGDVTALKPTIMTAVPAILDRVRDG
VRKKVDAKGGAAKKLFDFAYARRLSAINGSWFGAWGLEKLLWDVLVFGKIRAVLGGQLRY
LLSGGAPLSGDTQRFINICVGAPIGQGYGLTETCAGGTFSEFDDTSVGRVGAPLPCSFVK
LIDWPEGGYLISDKPMPRGEIVIGGSNITLGYFKNEEKTKEVYKVDEKGMRWFYTGDIGQ
FHPDGCLEIIDRKKDIVKLQHGEYVSLGKVEAALSISPYVENIMVHADPFYSYCVALVVA
AQQTLEGWASKQGIEFTNFEELCAKEQAVKEVYASLVKAAKQSRLEKFEIPAKIKVLAAP
WTPESGLVTAALKLKRDVIRKEFSEDLTKLYAS
NT seq
2082 nt
NT seq
+upstream
nt +downstream
nt
atgattccttacgctgctggtgtcattgtccctctagctttaacccttttggtccgcaac
gctaagaaagacaagaaacgaggcgtggtcgtcgacgacgtcggtggagagccgggtcat
accgttaggaaccacaggttcaaagatcccgtcagctcccactgggaagacatctccact
ctcccggagctattcgagatctcgtgtaagagccacagcgacaggttcttccttggcacc
aggaggttgatcgctagagaggtcgagactagcgaggacgggaaggtctttgagaagctt
catttgggtgattacgagtggaagacgtttggggagacgcttgaagctgtgtgtagtttt
gcttctggtttggttcagattgggcacaagtctgaggagcgtgtggctatttttgcggat
acgagagaagagtggtttattgcgttacagggctgcttcaggcgcaacgtcactgtggtt
actatctactcgtctttaggagaggaagctctttgtcactcgcttaatgagacagaggtc
acaaccgtgatctgtggtaacaaagaactcaagaagctcatggacataagccaacagctt
gagactgtcaaacgcgtcatttgcatggatgacgagttcccatctgaagcgagcagtact
tggacgacgacttcgctcgctgatgttcagaaacttgggcgtgaaagtcctgttgatcct
agcttcccactttcagctgatgttgctgttataatgtacactagtggaagcactggtctc
cccaagggtgttatgatgacgcatggtaatgtcctagctacagtttcagcagtgatgaca
attgttccagacctcgggaagagggacacatacatggcgtatttacctttggctcacatc
cttgagttagcagctgagagtgtaatggctactattgggagtgctattggatatggatct
cccttgacgctcactgatacttcaaacaagattaaaaagggcacaaagggagatgtcaca
gcgctgaagcctactataatgacagctgttccagccattcttgatcgtgtcagggacggt
gtccgcaaaaaggttgatgcaaagggaggagcggcaaagaaactgttcgactttgcatat
gcgaggagattatctgcaatcaatggaagctggtttggagcctggggactggagaagctc
ctatgggatgtgcttgtgtttggtaaaatccgtgcagtattgggaggtcagctccgttac
ttgctctctggtggagcccctctttctggtgacactcagagattcattaacatatgcgtt
ggggctccgatcggtcagggatatgggctaacagagacttgtgctggtggaactttctcg
gagtttgatgacacatccgttggccgtgtgggtgctccacttccttgctcctttgttaag
ctaatagactggccggaaggtggctacttgatcagtgataagccaatgcctcgtggtgaa
attgtaattggtggctcaaatattacacttgggtatttcaagaatgaagagaagactaaa
gaagtctacaaggttgatgaaaaggggatgaggtggttctacacaggagacataggacag
tttcaccctgatggttgccttgagataatagacagaaagaaggatattgttaagcttcag
catggggaatatgtctccttgggcaaagtggaagctgctctcagtataagcccctacgtt
gaaaacataatggttcatgctgatccgttttacagttactgtgtggctcttgtggtcgct
gcgcaacaaacactcgaaggttgggcatcaaagcaaggaatagagttcaccaacttcgaa
gagctgtgtgcgaaagaacaggccgtgaaagaagtgtatgcgtctcttgtcaaggcggct
aaacaatcacggttggagaagtttgagataccagcaaagatcaaagtgttggcggctcca
tggacgccggagtcagggttagtgacagcagcactaaagcttaaaagagatgtaattagg
aaggagttctctgaagatctcaccaagctatatgcttcctaa
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