Brassica napus (rape): 106390556
Help
Entry
106390556 CDS
T04128
Name
(RefSeq) tryptophan synthase beta chain 1, chloroplastic
KO
K01696
tryptophan synthase beta chain [EC:
4.2.1.20
]
Organism
bna
Brassica napus (rape)
Pathway
bna00260
Glycine, serine and threonine metabolism
bna00400
Phenylalanine, tyrosine and tryptophan biosynthesis
bna01100
Metabolic pathways
bna01110
Biosynthesis of secondary metabolites
bna01230
Biosynthesis of amino acids
Module
bna_M00023
Tryptophan biosynthesis, chorismate => tryptophan
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09100 Metabolism
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
106390556
00400 Phenylalanine, tyrosine and tryptophan biosynthesis
106390556
Enzymes [BR:
bna01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.20 tryptophan synthase
106390556
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PALP
Motif
Other DBs
NCBI-GeneID:
106390556
NCBI-ProteinID:
XP_013686503
UniProt:
A0A078FZW7
LinkDB
All DBs
Position
C9:complement(44645104..44647312)
Genome browser
AA seq
465 aa
AA seq
DB search
MAASGTVASFRTSVSSSPQLTHLRSPSKALKFTPLPSSRSRPSFSVSCTIAKDPPVLMSA
GSDPTLWQRPDSFGRFGKFGGKYVPETLMHALSELETAFHSLATDDDFQRELAGILKDYV
GRESPLYFAERLTEHYRRENGEGPLIYLKREDLNHTGAHKINNAVAQALLAKRLGKKRII
AETGAGQHGVATATVCARFGLECIIYMGAQDMERQALNVFRMRLLGAEVRAVHSGTATLK
DATSEAIRDWVTNVETTHYILGSVAGPHPYPMMVRDFHAVIGKETRRQALEKWGGKPDVL
VACVGGGSNAMGLFHEFVDDTEIRLIGVEAAGFGVDSGKHAATLTKGDVGVLHGAMSYLL
QDDDGQIIEPHSISAGLDYPGVGPEHSFLKDMGRAEYFSVTDEEALEAFKRVSRLEGIIP
ALETSHALAHLEKLCPTLPDGSRVVLNFSGRGDKDVQTVAKYLEV
NT seq
1398 nt
NT seq
+upstream
nt +downstream
nt
atggcagcttcaggcaccgtcgcttctttcagaacctccgtttcttcctctccccaattg
acccatttgagatccccctccaaagctctcaaatttacgcctctgccatcgtctcgctca
aggccatcgttctccgtctcctgcaccatcgccaaggacccgcctgttctcatgtccgcc
ggatctgacccgactctctggcaacgacccgattcgttcggtcggttcgggaagtttggt
ggcaagtatgtccctgagacgctgatgcacgctctctccgagctcgaaacggcgtttcat
tctctcgccaccgacgatgatttccagagagagttggcggggatcttgaaagactacgtg
ggtagagaaagccctctgtatttcgcagagaggcttacggagcattaccgccgcgaaaat
ggagaagggccgcttatatacttgaagagagaagacctgaatcacacaggagctcacaag
atcaacaacgccgtggctcaggctcttctcgccaagcgtttggggaagaagaggattatc
gctgagacaggagctggtcaacacggtgtggctacagctaccgtgtgtgctcgttttggt
ctggagtgcattatctatatgggtgctcaagatatggagagacaagcactcaatgtgttc
aggatgcgacttcttggtgccgaggtgagagcagttcactctggaacagcaacgttgaag
gatgctacttcagaagcgataagagactgggtgacaaatgttgagactactcattacata
ttgggatctgtggcgggtcctcacccttacccgatgatggtcagagactttcacgcggtg
ataggtaaagaaacgaggagacaagcgttggagaaatggggagggaagccggatgtgttg
gtggcttgtgttggtgggggttcaaacgcgatgggactcttccatgagtttgtggatgac
acagagatccggttgatcggtgtggaagctgcgggattcggagtggatagtggcaaacac
gctgctacgttgacaaagggagatgtgggtgttctacatggagctatgagttacttgctg
caagatgatgatggccaaatcattgaacctcactccatcagtgcaggattggactaccct
ggagttggaccggagcacagtttcctgaaagacatgggacgggctgaatactttagcgta
acggacgaagaagcattggaagcgttcaagagagtatcgcggttagagggaatcattcca
gcactggagacctctcacgcactagctcacctcgagaagctatgtcccacgttaccggac
ggaagcagagtcgtattgaacttcagcggaagaggagataaagatgttcagacggtagct
aagtatcttgaagtttga
DBGET
integrated database retrieval system
