KEGG   Brassica napus (rape): 106390712
Entry
106390712         CDS       T04128                                 
Name
(RefSeq) SEC12-like protein 1
  KO
K14003  prolactin regulatory element-binding protein
Organism
bna  Brassica napus (rape)
Pathway
bna04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:bna00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    106390712
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:bna04131]
    106390712
Membrane trafficking [BR:bna04131]
 Endoplasmic reticulum (ER) - Golgi transport
  Forward pathways
   Coat protein complex II (COP-II)
    106390712
SSDB
Motif
Pfam: Beta-prop_THOC3 Beta-prop_EML_2 WD40_Prp19 WD40_WDHD1_1st Beta-prop_WDR5 WD40 EIF3I Beta-prop_WDR3_1st WDR55 WD40_CDC20-Fz ANAPC4_WD40 Beta-prop_WDR36-Utp21_1st WD40_MABP1-WDR62_2nd Beta-prop_WDR3_2nd Beta-prop_WDR90_POC16_2nd Beta-prop_Vps41 Beta-prop_TEP1_2nd Beta-prop_WDR36-Utp21_2nd Beta-prop_HPS5 Beta-prop_VPS8 WD40_MABP1-WDR62_1st WDR90_beta-prop_4th Beta-prop_WDR19_1st Ge1_WD40 Beta-prop_Aladin Tricorn_2nd RMC1_N Beta-prop_RIG_2nd
Other DBs
NCBI-GeneID: 106390712
NCBI-ProteinID: XP_022557984
LinkDB
Position
C4:38844186..38847674
AA seq 397 aa
MEIEEASRGESGHVVCGSWIRRPKKVNWAIIAKATKRRGSSSPPLLNIYSFDPITTSLSS
SPLATHTLNESDGDPVAISVHPGGDYFVCSTSKGGCKLFEIAGGATTGITILEKELPPLQ
NAGLQKCMAFSFDGSKLAVGGVDGCLRIMDWPNLSVILEEPKAHKSIRDMDFSLDSEFLA
TTSTDGSARIWKAEDGFPLSTLERSGEENIELCRFSKDGTKPFLFCAAQRGDVPVVNVYD
ISTWKKLGFKKLSRKSASTIAVSLDGKYIALGGKDGDISVAEVKTMEIYHYSKRLHLGQT
IASLEFCHSERVMLTTSSEWGEMVTKLTVPKEWKEWQIYALLFCLFLASVVLAYVFFENS
DSFWKLPMGKDQRRPKISLFGDSSTSTKDHNRWNLDL
NT seq 1194 nt   +upstreamnt  +downstreamnt
atggagattgaagaagcgagtcgtggtgaaagtgggcatgtggtgtgcggatcatggatt
cgtcgaccgaagaaagtaaactgggccatcatcgccaaagctaccaaacgccgtggctcc
tcttctcctcctctccttaacatctactctttcgatcccatcactacttctctctcctcc
tctcccttggcaacacatacactcaatgagagtgatggtgatcctgtggcaatctcagtg
caccctggcggagattattttgtttgctcaacttccaaaggtggttgcaagttgtttgag
attgccggaggagcaacaacaggtattactatcttagaaaaagaactccctcctctccaa
aatgctggactacaaaagtgtatggccttcagctttgatggctctaaattagctgttggt
ggagtggatggatgtctgagaattatggattggccaaacctaagtgtaatcttggaggag
ccaaaagcacacaaatccattcgggatatggatttcagtttggactcagagttcttagcc
acaacatcaacagatggatcagctagaatatggaaagcagaagatggtttccctttgtct
actttggaacgtagtggggaagaaaatattgaactgtgccggttctctaaagatggaaca
aaaccttttctgttctgtgctgctcagagaggtgacgttcctgtggtaaatgtttatgac
attagtacatggaagaagcttgggttcaagaagctgtcaaggaagagtgcatctacaata
gcagtcagcttggatggcaaatatattgctttgggtggcaaagatggggatatatcagtc
gctgaagtgaagacaatggagatataccactacagtaagaggctgcatcttggtcaaacc
attgcttcacttgagttctgccatagtgaaagggtaatgctgacaacatcgagtgaatgg
ggtgagatggtgacaaaactcactgtaccaaaggagtggaaagagtggcagatatatgca
ctgttattttgcttgttcctggcgtcagtggtacttgcatacgtgttcttcgagaactcg
gattcgttttggaagttgccaatggggaaagatcaaagaagaccaaagattagtcttttt
ggagattcatccacgtctactaaggatcataataggtggaacttggacctatag

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