Brassica napus (rape): 106390774
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Entry
106390774 CDS
T04128
Name
(RefSeq) ribonucleases P/MRP protein subunit POP1 isoform X1
KO
K01164
ribonuclease P/MRP protein subunit POP1 [EC:
3.1.26.5
]
Organism
bna
Brassica napus (rape)
Pathway
bna03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
106390774
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
bna03009
]
106390774
03016 Transfer RNA biogenesis [BR:
bna03016
]
106390774
03029 Mitochondrial biogenesis [BR:
bna03029
]
106390774
Enzymes [BR:
bna01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.5 ribonuclease P
106390774
Ribosome biogenesis [BR:
bna03009
]
Eukaryotic type
Pre-60S particles
RNases
RNase MRP
106390774
Transfer RNA biogenesis [BR:
bna03016
]
Eukaryotic type
5'processing factors
Ribonucrease P
106390774
Mitochondrial biogenesis [BR:
bna03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
RNase MRP
106390774
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
POPLD
POP1_N
POP1_C
Motif
Other DBs
NCBI-GeneID:
106390774
NCBI-ProteinID:
XP_013686759
LinkDB
All DBs
Position
C4:39576669..39580297
Genome browser
AA seq
803 aa
AA seq
DB search
MASANGNNNKKRGGGLSSLAPREISVQKFSEARAAELESLHSIVSERLNKDFRSKRNQRR
RTNAYTSQPSKRRNIKRQRSESLLLSIGQQASSSHETKIPRRVKRRMELKGNPESGFSTT
GDGTKRLRTHVWHAKRFSMTKLWGFHLPLGLHGRGRGSRDILNKSRQGVLVHDASYHIAV
QLEGPEGSLLSILNMLLEPSPSSHSKEVFDSILTGFCYGNSMLYHVEPPVSQVIAPVIYM
WRPSQLPKRIDEEKAADCVGNDFRKLWVWIHASSFSEGCASLKLACQNQMNETGVLVDCL
SLEGQLAKLELFGTKASQLLQKTLHPVTSSSQSPPSVLRKCSMEKAEAKNVADPYTEESI
PSCAILPRFVIDPRLIPNNPCDDTTMSAEMTKTEPTESLEMMTTSTEAETFKCLWDANSE
LYPPEEENVLCWEKHQSRMKSFCIDDAADEFPKISSKPRSSRSCPLLLLKHRKLGDTATG
WSLILPLSWVKVFWNAFVSKGGQAIGQREKRWLSCDAGLPFFPSDFPDCKAYSSLTMSEA
VDVEEKAQRRPLAVRPFRIPIPPPWSSIHVTRCVKESSDQKLTSGETSGVEIFSNGGNVF
DGMVARTPDSLPTFLQTFTNRVETIQEDETKARAEIHQRSDNKLCLVRVLLHAFKEGSFE
EGAVVCAPSLADVSLLKSGCSEGEEGRVTIPQSSVSSYFLEQPSGTWELNVPENPHTKQS
HRWPIGFVTTGFVRGSKKPTAEALCDAVLLGRLREEQWRGKDVKRRKKEIYVLVRNLRSC
AYRLALATIVLEQQDASGDAHCF
NT seq
2412 nt
NT seq
+upstream
nt +downstream
nt
atggcttcggctaatgggaacaacaataagaaaagaggtggagggctatcgtcgctcgcc
cctcgagaaatcagcgtccagaaattctcggaggctagggcagcagagctcgaatctctt
cactccatagtgtctgagcgtttgaacaaggacttccggtcaaagaggaaccagaggaga
aggaccaatgcctacactagccaaccttcaaagagacgtaacattaagaggcaaagatca
gagtcattattgttatctattggtcaacaagcatcatcatctcatgaaacaaagatccca
agacgagtcaagaggagaatggaacttaaagggaaccctgaatcgggtttttctaccact
ggtgatggaacaaagaggctgagaacacatgtttggcatgctaaacgcttctctatgact
aagctttggggctttcaccttcctcttggtttacatggcagaggaaggggatccagggat
atcttgaacaagtctaggcaaggtgttcttgtgcacgatgcaagctatcacattgctgtg
cagttggagggtccagagggctcactcttgtcgatattaaacatgctactggagccttct
ccttcatctcattccaaggaagtcttcgactctattctcacaggattttgttatgggaac
tccatgctttatcatgtcgaaccaccagtttctcaggtgattgctcctgtaatttatatg
tggagaccttctcagctacctaagagaatagatgaggagaaagcggctgactgcgtagga
aatgactttcgaaaactatgggtgtggatccatgcttcttccttcagtgagggatgtgct
tctcttaaactagcttgtcaaaatcagatgaatgagacaggtgtcttagttgattgcttg
tcactcgaaggccagcttgcaaaacttgaactttttggtacaaaagcatctcagcttctg
caaaagaccctacatcctgttacaagtagctcacagagtcctccctctgttttaagaaaa
tgttcgatggaaaaagccgaagctaagaacgttgctgatccttacacagaggagagcata
ccatcttgcgctattttaccacggtttgtcatagatccgcggttaatcccgaataatcct
tgtgatgatactacaatgtcagctgaaatgaccaaaacggagcctactgagtcacttgag
atgatgacaaccagcacagaggctgaaactttcaagtgcttatgggatgcaaatagtgaa
ctgtatcctccagaagaagagaacgtattgtgttgggagaagcatcaaagtcgtatgaag
tctttttgcatcgacgacgcagctgatgagtttcctaagatatctagcaagccaaggagt
tcgaggtcttgtcctttactgcttcttaaacatagaaagcttggggatacagctacagga
tggtctctcatacttccccttagttgggtcaaagttttctggaatgcctttgtctcaaaa
ggaggtcaggcaataggtcagagggagaaacgctggctttcttgtgatgctggtttgccg
tttttcccatcagattttcctgactgcaaagcatattcatctttaacaatgagtgaagct
gtagacgtggaggagaaggcacaaaggcgacctcttgccgtgagacctttcagaattccc
attccgcctccatggagtagtatccatgtcacgcgctgtgtcaaagagagttccgatcaa
aagcttacaagcggtgagactagtggagtggagatttttagtaatggtggtaatgtattc
gatggtatggtggcgagaacaccagattcgctgcctacttttctccaaactttcacaaat
cgtgtggagacgattcaagaagatgaaacgaaagcaagagctgagatccatcagaggagt
gataacaaactatgccttgtcagagttcttctacatgctttcaaggaaggctcattcgaa
gaaggcgcggttgtatgtgcaccatctctcgcagacgtatcattactaaaatccggctgc
agtgagggagaagaagggcgtgttacaatccctcaatcttctgtaagctcttactttcta
gaacaaccttctggaacctgggaacttaatgtccctgaaaaccctcatacaaagcaatct
catagatggccaattgggtttgtgacgacaggatttgtccgtgggagtaaaaagccgacg
gcggaagctctgtgtgatgcagtgttgttagggagactaagagaagagcagtggaggggg
aaagatgtgaaacggagaaagaaggagatttatgttctggttagaaacctaagatcttgt
gcttacagactcgcactggccactattgttttggagcaacaagacgcttctggtgatgcc
cactgcttttaa
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