Brassica napus (rape): 106390873
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Entry
106390873 CDS
T04128
Name
(RefSeq) small RNA degrading nuclease 1-like
KO
K14570
RNA exonuclease [EC:3.1.-.-]
Organism
bna
Brassica napus (rape)
Pathway
bna03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
106390873
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
bna03009
]
106390873
Ribosome biogenesis [BR:
bna03009
]
Eukaryotic type
Pre-60S particles
RNases
106390873
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Motif
Pfam:
RNase_T
DNA_pol_A_exo1
RRM_1
SET_assoc
DEDDh_C
Motif
Other DBs
NCBI-GeneID:
106390873
NCBI-ProteinID:
XP_013686868
UniProt:
A0A078GVW0
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All DBs
Position
A9:32226251..32228746
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AA seq
412 aa
AA seq
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MELKLATAEKQVLEELVKLVQSRGLCGENGGWKEFLDAKDKKKIGSPNDPSKRSHDELVA
FLTTFKKKQDLQVLKCHANFLLIDKLEQESPGNDTPEQSLVRLTVEHPAYSLDYSFEPHS
EDWFVSDVGMKTSKVMESTEMVAVDCEMVLCDDGTEGLVRVGIVDRHLKVILDEFVKPDR
PVVDYRTDITGITAEDIEKATLSLVDIQETLQPFLSNGAILVGHSLNKDLEVLKIDHPKV
IDTALVFKYPNARKPRRASLNNLCKSILGYEVRKAGVSHDCVNDATAAMKLALAVIEKRA
NTTIPPSKEMLEVEKAKLFIHKIPHNVTSEELEQVLSGEFTLDVKPAKTSRGCYCAFVVF
RSSKEADQAFENVDGDQGQDSFGLPQKLVVFKLTSGSRVSIYVRKMVEDGSA
NT seq
1239 nt
NT seq
+upstream
nt +downstream
nt
atggagcttaaactagccaccgccgagaaacaagtgcttgaagagctggtgaagctagtg
cagagtcgaggcctgtgcggcgaaaacggaggatggaaggagtttttagatgctaaagac
aaaaagaagattggatctccaaatgacccttccaagcgttcccatgacgaacttgtcgcg
tttctgacaaccttcaagaagaaacaagacttgcaggttctgaaatgtcacgccaatttt
cttctgattgacaagttagagcaggaatctcctggtaatgacactcctgaacagagtcta
gttcgattgactgttgagcatcctgcttactctctagactactcattcgagccacattct
gaggactggtttgtatccgatgttggaatgaagacgtccaaggtgatggaatcaaccgaa
atggtagctgttgactgtgagatggttctttgcgacgatggaactgagggtttggtcaga
gttggtattgtagaccgccatttaaaggtgatccttgacgaatttgtgaaaccggacaga
cctgtggttgactataggacagacattacagggattactgctgaagatatcgaaaaagct
accctctccctcgtagatattcaggaaactttgcagccctttctatcaaatggtgcgatt
ttggttggtcacagtttgaacaaagatttggaagtgttgaagatagatcatccaaaagta
atcgataccgcacttgtattcaagtatcccaatgcaagaaagcccagaagagcttcactt
aacaacctttgcaagtctattttgggttatgaagtcagaaaggcaggagtctctcatgat
tgtgtaaacgacgcaacagctgcgatgaaacttgcacttgctgttattgagaaaagagcc
aacacaacaatcccaccatctaaagagatgttggaggttgagaaagcaaagctctttata
cataaaatccctcacaatgtgacatctgaagagctggagcaagttctttctggagagttt
acacttgatgttaagccagcaaaaacatcgagaggttgctattgtgcgtttgttgttttc
cgtagctcaaaagaagcagatcaagcatttgaaaacgttgatggagaccaaggccaggat
tcatttggtttgccacaaaaactggttgtatttaagctgacttctggttcaagagttagt
atatatgtccgtaaaatggttgaagatggttccgcgtag
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