Brassica napus (rape): 106390948
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Entry
106390948 CDS
T04128
Name
(RefSeq) chaperonin 60 subunit beta 2, chloroplastic
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
bna
Brassica napus (rape)
Pathway
bna03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
106390948
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bna03019
]
106390948
03110 Chaperones and folding catalysts [BR:
bna03110
]
106390948
03029 Mitochondrial biogenesis [BR:
bna03029
]
106390948
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
bna04147
]
106390948
Enzymes [BR:
bna01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
106390948
Messenger RNA biogenesis [BR:
bna03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
106390948
Chaperones and folding catalysts [BR:
bna03110
]
Heat shock proteins
HSP60 / Chaperonin
106390948
Mitochondrial biogenesis [BR:
bna03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
106390948
Exosome [BR:
bna04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
106390948
Exosomal proteins of other body fluids (saliva and urine)
106390948
Exosomal proteins of breast cancer cells
106390948
Exosomal proteins of colorectal cancer cells
106390948
Exosomal proteins of bladder cancer cells
106390948
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
KH_PARP14_2
Motif
Other DBs
NCBI-GeneID:
106390948
NCBI-ProteinID:
XP_013686960
LinkDB
All DBs
Position
A3:17341203..17344885
Genome browser
AA seq
590 aa
AA seq
DB search
MASTFTATSSLGSLIAPNALKFPSSTFGKRQNVCSRRTHPAIVCAAKELHFNKDGSTIKK
LQTGVNKLADLVGVTLGPKGRNVVLESKYGSPKIVNDGVTVAREVELEDPVENIGAKLVR
QAAAKTNDLAGDGTTTSVVLAQGFIAEGVKVVAAGANPVLITRGIEKTAKALVHELKRMS
KEVEDSELADVAAVSAGNNPEVGNMIAEAMSKVGRKGVVTLEEGKSAENHLYVVEGMQFD
RGYISPYFVTDSEKMSVEYDNCKLLLVDKKVTNARDLVGVLEDAIRGGYPILIIAEDIEQ
EALATLVVNKLRGTLKIAALKAPGFGERKSQYLDDIAILTGATVIREEVGLSLDKAGKEV
LGTASKVVLTKEMTTIVGDGSTQEAVNKRVIQIKNLIEQAEQEYEKEKLNERIAKLSGGV
AVIQVGAQTETELKEKKLRVEDALNATKAAVAEGIVVGGGCTLLRLAAKVDAIKDTLEND
EEKVGAEIVKRALSYPLKLIAKNAGVNGSVVSEKVLANDNVKFGYNAATGKYEDLMAAGI
IDPTKVVRCCLEHAASVAKTFLMSDCVVVEIKEPEPVPAGNPMDNSGYGY
NT seq
1773 nt
NT seq
+upstream
nt +downstream
nt
atggcatcgactttcactgctacgtcttcacttggctccttgattgctcccaatgccctc
aagtttccttcaagcacatttggaaagagacagaatgtgtgctcaagaagaacccatcct
gccattgtttgtgcagccaaggagttgcatttcaacaaggatggttctaccataaagaaa
cttcaaaccggtgttaacaagctagccgaccttgtcggtgtcacacttggaccaaaaggg
agaaacgttgtccttgagagcaagtatggatctccaaaaattgttaatgatggtgtcacc
gttgctagggaggtggagttggaggacccagttgagaacattggtgcaaagcttgtaagg
caagcagctgcaaagaccaatgacttggctggtgacggtacaacaacatccgttgttctt
gcacaaggttttattgctgagggtgtcaaggtggtggctgcaggtgctaaccctgtgtta
atcaccagaggcattgagaagacagcaaaggctttggttcacgagctgaagcgaatgtcc
aaggaggttgaagacagtgagcttgcggatgtggcggctgttagtgccggcaacaaccct
gaagttggaaacatgattgctgaagcaatgagcaaagtgggcaggaaaggtgtggtgaca
cttgaggagggtaaaagcgctgagaatcacctttacgtggtggaaggaatgcagtttgac
cgtggttatatctccccatacttcgttacagacagtgagaaaatgtctgtcgagtatgat
aattgcaagttgcttcttgttgacaagaaggttaccaatgcaagggaccttgttggtgtt
ctagaggatgcaattagaggcggttacccgatcctaatcattgcagaagatattgaacaa
gaagctttggctactcttgttgttaacaagcttagaggcactttgaaaatagcagctctt
aaagctcctggatttggagagcgcaagagccagtaccttgacgatatcgccattctaacc
ggagcaactgtgataagagaggaagttggtctttctcttgacaaagctgggaaagaggtt
ttaggtaccgcctctaaggttgttctcaccaaggagatgacgaccattgtgggtgatggt
agcacacaggaagctgtgaacaagcgtgtgatacagattaagaatttaattgagcaagcg
gagcaagagtatgagaaggaaaaattgaatgagagaattgcaaagctttccggtggagtt
gctgtaattcaagttggagcacaaactgagacagagctcaaagaaaagaagctaagagtt
gaagatgctcttaacgctacaaaggctgcggttgcggaaggtattgttgttggtggtggt
tgcactttacttcgtcttgcagccaaggttgatgccatcaaggatacccttgaaaacgat
gaagaaaaggttggagcagagatcgttaaaagagccttgagttaccctctgaagttgata
gcaaagaatgctggtgtcaacggaagcgttgtcagtgagaaggtgctagctaacgataac
gtgaagttcggatataatgctgcaactgggaagtatgaagatctgatggctgcaggaatc
atcgaccccacaaaggttgtgagatgttgcttggaacatgcggcctcggttgcaaagacg
ttcttgatgtctgactgtgtggttgttgagatcaaggagccagagccagttcctgctggc
aacccaatggacaattcaggatatggatactga
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