Brassica napus (rape): 106391209
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Entry
106391209 CDS
T04128
Name
(RefSeq) E3 ubiquitin-protein ligase SINA-like 7
KO
K04506
E3 ubiquitin-protein ligase SIAH1 [EC:
2.3.2.27
]
Organism
bna
Brassica napus (rape)
Pathway
bna04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
106391209
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
bna04121
]
106391209
Enzymes [BR:
bna01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
106391209
Ubiquitin system [BR:
bna04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
SINA (Seven in absentia) proteins
106391209
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sina_RING
Sina_ZnF
zf-RING_UBOX
Motif
Other DBs
NCBI-GeneID:
106391209
NCBI-ProteinID:
XP_048633687
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Position
A4:14040242..14041417
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AA seq
276 aa
AA seq
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MEGCSEDEMRLTDSSSQKRQRTSTESEEKKKRTGTLLDLDATDCPVCFDSLTIPIFQCEN
GHVACSTCCGKLRQKCATCSLTMASRNRALERILELLTVPCPNDGCSATVLYAETSTHVK
HCAYTHRPCPFSSCDFICSFKDLYEHCFAAKHYQSSRMFECGTQVFITPLCGKRIILKEE
TTEGGGGGEIVVVECFQMPQGRIIYASCIGPGTDVFSSKFELYPASGRRLSSESKLERVG
EVSDELPGGSVMFVPSFTCPDYKFFITIKRGDLLGS
NT seq
831 nt
NT seq
+upstream
nt +downstream
nt
atggaaggttgctccgaggacgagatgagactgaccgacagtagttcgcaaaagaggcaa
cgtacttccaccgaatctgaggagaagaagaaacgcaccgggacgctgctggatctggat
gctacggactgtcccgtttgcttcgattctctcaccattcccatctttcagtgtgagaat
ggtcatgtagcatgctctacttgctgcggaaagctgcgtcagaaatgtgcaacatgctcc
ttaaccatggcttcccgcaacagagctttggaacggattctcgagctacttacagttcct
tgtccaaatgatggttgctccgcgactgtcctttatgctgaaacatcaacacatgtaaag
cactgtgcttacacccaccgtccttgcccttttagcagctgtgactttatttgctccttc
aaggatttatatgaacactgctttgctgctaaacactaccagtcctctcgcatgtttgaa
tgtggaacgcaagtgtttataacacccttatgtggtaagaggatcattctcaaggaagag
actacagaaggaggaggaggaggagaaattgttgttgtggagtgtttccagatgcctcaa
ggtcgaattatatatgctagctgtattgggccaggaacagacgtgttctccagtaaattc
gagctgtatccagcttcgggtaggcgtttgtcttctgaatcaaaactcgaaagagtcggt
gaagtaagcgatgaactaccaggtgggtctgttatgtttgttccttcattcacgtgccct
gactacaagtttttcataaccatcaagagaggagacttgctaggatcatga
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