Brassica napus (rape): 106391236
Help
Entry
106391236 CDS
T04128
Name
(RefSeq) F-box/LRR-repeat protein 3
KO
K10268
F-box and leucine-rich repeat protein 2/20
Organism
bna
Brassica napus (rape)
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
bna04121
]
106391236
Ubiquitin system [BR:
bna04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
106391236
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_6
LRR_At5g56370
LRR_4
LRR_At1g61320_AtMIF1
LRR_8
Motif
Other DBs
NCBI-GeneID:
106391236
NCBI-ProteinID:
XP_013687298
LinkDB
All DBs
Position
A6:22733071..22736069
Genome browser
AA seq
640 aa
AA seq
DB search
MSHSILSALSEDLLVRVYGFLDPPCRKTWRLVSREFHRVDSLSRTSIRILRVEFLPALLF
KHPNLSSLDLSVCPKLDDDAVLRIALDGAVSTSRLKSLNLSRATAVRARGLETLARLCRA
LERVDVSHCWAFGDREAAALSVAAGLRELKMDKCLSLSDVGLARIVVGCSKLNKISLKWC
MEISDLGIDLLCKKCKDLKSLDVSYLKITNESVRSIALLPKLEVLEMVSCPLIDDAGLQY
LENGSPSLKEIDVTRCDRVSSSSLISIVKGHPDLQHLKASHCISEISLSFLHNIKALKHL
KTLWIDGARVSDSSLLTLSASCRALTELGVSRCVGVTDIGMMGLARNCSNLKALNLACCG
FVTDAAISAVAQSCLNLESLQLESCHLITEKGLQSLGCYSKRLQELDLTDCDGVNDRGLE
YISKCSNLLRLKLGLCANISDKGIFHIGSKCSKLLELDLYRCAGFGDDGLAAISRGCKSL
NRLILSYCGELTDTGAEKIRQLEQLTHLELRGIKNITGTGLAAIARGCKKLAYLDLKQCE
NIDDSGFWALAYFSRNLRQINLCNCSVSDTALCMLMSNLSRVQDVDLVHLNRVTVEGFEF
ALRACCNRLKKLKLLAPLRFLLSSELLEVLHARGCRIRWD
NT seq
1923 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcattccattttatccgctttgtcggaagatctcctggttcgcgtctacgggttt
ctagacccgccgtgtcggaaaacatggcgactcgtcagcagagagttccaccgagtcgac
tcgctgagccgaacctcaatccgaatcctccgcgtcgagttcctccccgcgcttctcttc
aagcaccccaacctctcctcgctcgacctctccgtgtgccccaaactcgacgacgacgcc
gttttgcgcatagccctcgacggcgccgtttcgacgtcgcgtctcaagtcgctcaacctg
agccgcgccaccgcggttcgagccaggggactggagacgctggctcgtctgtgccgcgcg
cttgagcgagtcgacgtgtctcactgctgggcgttcggcgacagggaggcggcggcgctt
tccgtcgcggcggggctcagggagctgaagatggacaaatgcttgagcctaagcgacgtc
ggattggcgaggatcgtcgtcgggtgcagtaagcttaacaagattagcttgaagtggtgt
atggagatctctgatcttgggattgatcttctctgtaagaaatgtaaagacttgaagtct
ctcgatgtttcgtatctcaagatcacgaatgagtcagtccgctctatagctttactacca
aagctcgaggttttagaaatggtaagctgcccgttgatagatgatgctgggttacagtat
ctcgagaatggctctccttcactaaaggagattgatgtcacaaggtgtgatcgtgtgagt
tcgtccagcttaatctccatagtcaaaggccatcctgatcttcaacaccttaaagccagt
cactgtatatccgaaatatctctgagcttcttacacaacatcaaagctttaaagcatctc
aagactctatggatcgatggagctcgtgtctctgattcctctctgttaaccttaagcgct
agctgtagagccttaacagaactcggagtgagcagatgtgtaggtgtgactgacattggg
atgatgggactcgcacgcaactgctccaacctgaaagcccttaacctggcgtgctgcgga
ttcgtgacggatgcagccatctctgctgtagctcaatcttgtctgaacctggagagttta
cagttagagtcttgccatttgataacagagaaaggtcttcaatcgcttggatgttactcc
aagcgtcttcaagaactcgatcttactgactgtgatggcgttaatgatagagggcttgag
tatatctcaaaatgttcgaatcttctaagattgaaacttggactctgcgcaaatatctca
gacaaagggatctttcatatcggctccaaatgttcgaagcttctagaacttgatctatac
cgctgtgctggttttggagatgatggtttagctgctatatcaagaggctgcaagagcttg
aaccggctcattctatcgtactgcggtgaactaacagacacaggggctgagaaaatccgc
cagctagaacaactgactcaccttgaacttcgagggataaagaatataacgggtactggt
ctagctgcaattgcgcgcggctgcaagaaactggcttacttggacctcaagcaatgtgag
aatatcgatgactcaggcttctgggcgcttgcgtacttctcaagaaacctaagacagata
aacttgtgcaattgctctgtctctgatacggctctatgcatgttgatgagcaatctgagt
cgggttcaagacgttgacttagtccacttgaaccgcgtgactgtggaagggtttgagttt
gctctaagagcatgttgcaacaggctcaagaagcttaagcttctcgcacctctcagattc
ttgctctcatctgaattgctcgaggtgcttcatgctcgtggttgccgaattagatgggac
tga
DBGET
integrated database retrieval system
