Brassica napus (rape): 106391295
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Entry
106391295 CDS
T04128
Name
(RefSeq) protein CHROMATIN REMODELING 19
KO
K14439
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1 [EC:5.6.2.-]
Organism
bna
Brassica napus (rape)
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
bna03036
]
106391295
Chromosome and associated proteins [BR:
bna03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
106391295
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
DEAD
AAA_22
SWI2_SNF2
Motif
Other DBs
NCBI-GeneID:
106391295
NCBI-ProteinID:
XP_013687365
LinkDB
All DBs
Position
A9:15628693..15632619
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AA seq
758 aa
AA seq
DB search
MKRDFDEISEEEWQQHSFNASRVLKQPRAPKTTTTTTTPPPPRPSPPIESFAYRRPSKAI
ESDDDCVVVEDSGESDSDVKIVNGGDDLLLDDEEEEAKVVVVRRARVGRRFVIEDEEGSE
EDEVEVEEVSSSEGEGEDGGGGDGDEDVVGKALQKCAKISADLRKELYGSSSGVTTCDRY
SEVESSTVRIVTQTDIDEACKAEDSDFQPILKPYQLVGVNFLLLLYKKGIEGAILADEMG
LGKTIQAITYLTLLNHLNNDPGPHLVVCPASVLENWERELRKWCPSFTVLQYHGAARAAY
SRELNSLSKAGKPPPFNVLLVCYSLFERHSEQQKDDRKVLKRWRWSCVLMDEAHALKDKN
SYRWKNLMSVARNANQRLMLTGTPLQNDLHELWSLLEFMLPDIFTTENVDLKKLLNAEDT
ELITRMKSILGPFILRRLKSDVMQQLVPKIQRVEYVHMEKKQEDTYKEAIEDYRAASQAR
VLKLSSKSLAKALPKRQISNYFTQFRKIANHPLLIRRIYSDEDVIRIARKLHPIGAFGFE
CSLERVIEEVKSYNDFRIHQLLLQYGVNNTKGTLSEKHVMLSAKCRTLAELLPSMKKSGN
RVLIFSQWTSMLDILEWTLDVIGVTYRRLDGSTQVTDRQTIVDTFNNDKSIFACLLSTRA
GGQGLNLTGADTVIIHDMDFNPQIDRQAEDRCHRIGQTKPVTIFRLVTKSTVDENIYEIA
KRKLVLDAAVLESGVHVDDNGDTPEKTMGEILASLLMA
NT seq
2277 nt
NT seq
+upstream
nt +downstream
nt
atgaaacgcgatttcgacgaaatctccgaggaggagtggcagcagcactcgttcaacgct
tcgcgagttctcaaacagccacgtgctcccaagacaacgacgacgacgacgactcctcct
cctcctcgtccgtcgcctccgattgagtctttcgcctacaggaggccgtcgaaggcgatt
gagagcgatgacgactgtgtggtggtggaggattcaggagaatcggattcggatgtgaag
attgtgaacggaggagatgatttgttgttggatgatgaggaggaagaggccaaggttgtg
gtggtgcgacgtgcgcgagttggtaggaggtttgtgattgaagacgaggaagggagtgag
gaggatgaggttgaggttgaggaggttagttctagtgaaggtgaaggtgaagatggtggt
ggaggagacggagatgaggatgtggttgggaaggcgttgcagaagtgtgctaagatctca
gcggatcttaggaaggagctttatggtagctcttctggggttactacttgtgataggtac
tctgaagtcgagtcttctactgtgaggattgtcactcagactgatattgatgaagcttgt
aaagcagaggattctgattttcagcctatactaaagccctaccagttagttggtgttaat
ttccttcttctcttgtataagaagggaattgaaggagccattctagccgatgagatgggt
cttggaaagactattcaggcaatcacatatttaaccctcctaaatcacttgaacaatgac
cctggtcctcatttggttgtatgccctgcctctgtcctggaaaactgggagagagagctc
agaaagtggtgtccatcatttactgtacttcagtatcacggggctgcgagagcagcctac
tctagagaattgaattctctgtcaaaagctgggaagccgccaccattcaatgtacttctt
gtgtgttattctttgtttgagcggcatagtgaacaacagaaagatgaccggaaggtattg
aaacggtggcgttggagctgtgttttgatggatgaagcccatgctttaaaggataagaac
agttataggtggaaaaacctgatgtctgtggccagaaacgctaaccagcgtcttatgctt
acaggaacgcctctacaaaatgatttgcatgaactatggtcgcttctggagttcatgtta
cccgatatatttactacagagaatgttgacttgaagaagctgttgaacgcagaagacacc
gagttgattactcgaatgaaatctattcttggtcctttcatcttgaggcgtttgaaatct
gatgtcatgcagcaacttgttccaaagatacagcgggttgagtatgtccatatggagaaa
aaacaggaagatacatataaagaagccatagaggactatcgtgctgcttctcaagcacgg
gttttgaagctatcatcaaaatccttagccaaggcacttccaaagcggcaaatttcaaac
tattttactcaatttcggaagattgcaaatcatccattgttaattaggagaatatacagc
gatgaagatgtcattcgcatcgcgaggaagttgcacccaattggtgcgtttggatttgag
tgctccttggaaagagtcattgaagaagttaagagttacaacgattttcgtatacaccag
ctattgctccaatatggagtcaacaataccaaaggaactctgtcagaaaaacatgttatg
ctctcagcaaaatgtcggacattagctgagcttcttccttcaatgaagaaatccggcaat
cgtgttctaatattcagtcaatggacatcgatgctcgatatcttggaatggacactggat
gttataggcgttacataccgaagacttgatggcagtactcaagtcacagatagacaaact
atagtggacacattcaacaacgataagtcgatatttgcttgtctgttgtcaactcgagca
ggcggacaaggtctgaatttaacgggagcagatacagtgattattcacgatatggatttt
aatccacagattgatcggcaagctgaagatcgatgccatcgtatcggtcaaaccaaacca
gtcactatcttcagactggtgacgaagtcaacggttgatgagaacatctacgagatagca
aagcggaaacttgtacttgatgcggcggttctagagtcgggagttcatgtagatgacaac
ggagacacgcctgagaaaaccatgggagagattctcgcttctcttctcatggcataa
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