Brassica napus (rape): 106391296
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Entry
106391296 CDS
T04128
Name
(RefSeq) uracil-DNA glycosylase, mitochondrial
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
bna
Brassica napus (rape)
Pathway
bna03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
106391296
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bna03400
]
106391296
Enzymes [BR:
bna01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
106391296
DNA repair and recombination proteins [BR:
bna03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
106391296
Prokaryotic type
106391296
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-GeneID:
106391296
NCBI-ProteinID:
XP_013687366
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All DBs
Position
C1:41591633..41593592
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AA seq
316 aa
AA seq
DB search
MASSTSKTLIDFIHPAKRLKASYFPAVSAASCSRGLCSASKSPPRVVTVTNSVADDSSRS
DFNKSVATSKRNLAVCSEKVAKAKAEGSCCHVRLNELLVEESWLKALPGELQKPYFKTLS
DFLERESKGPLIYPPQHLVFNALNTTPFDRVKAVIIGQDPYHGPGQAMGLSFSVPEGEKL
PSSLLNIFKELQKDVGCSIPRHGDLQKWAVQGVLLLNAVLTVRSKQPNSHAKKGWEQFTD
AVIQSISQQKEGVVFLLWGRYAQEKSKLIDGNKHHILTAAHPSGLSAHRGFFNCRHFSQA
NQLLEQRGIPPIEWQL
NT seq
951 nt
NT seq
+upstream
nt +downstream
nt
atggcttcgtccacatctaaaaccctaattgactttattcatcccgcaaaacgcctcaaa
gcttcctactttcccgccgtttccgccgccagttgttcccgcggtttgtgttctgcctca
aaatcgccgcctcgcgtagtaaccgttaccaattccgtcgccgacgactcgtcccgctcc
gatttcaacaaatccgtagccacgtccaaacgcaacctcgccgtctgctccgagaaggtc
gcaaaagctaaagctgaaggaagctgctgccacgtgcgtttgaatgagctgttagtcgaa
gagtcatggcttaaagctctccctggagaattgcaaaaaccctacttcaagaccctttct
gacttccttgaacgtgagagtaaaggccctttgatatatccgccgcagcatttggttttc
aatgctcttaatacaacacctttcgaccgagtcaaggctgtcatcatcgggcaggatccg
taccatggacctggtcaagctatgggtttgtctttctctgtgcctgaaggagagaagctt
ccttctagtctgttgaacatattcaaggagcttcagaaagatgttggctgttcaatcccg
cgtcatggtgatctacagaaatgggctgtgcagggtgttttgctgttgaatgctgttctt
acagtaaggagtaagcagccgaactcacatgcaaagaaaggatgggaacagttcactgat
gctgtcattcaaagcatttcgcagcagaaggaaggtgttgtctttctcctctggggaaga
tatgctcaagagaaatccaagttgatagatgggaataaacatcatatactcacagcagct
catccatctggtttgtctgcgcatagaggcttcttcaactgcagacatttctctcaagca
aaccagctactcgaacagagggggattcctcccatagaatggcaactttaa
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