Brassica napus (rape): 106391365
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Entry
106391365 CDS
T04128
Name
(RefSeq) E3 ubiquitin-protein ligase SINA-like 10
KO
K04506
E3 ubiquitin-protein ligase SIAH1 [EC:
2.3.2.27
]
Organism
bna
Brassica napus (rape)
Pathway
bna04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
106391365
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
bna04121
]
106391365
Enzymes [BR:
bna01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
106391365
Ubiquitin system [BR:
bna04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
SINA (Seven in absentia) proteins
106391365
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sina_ZnF
Sina_RING
DUF1644
Motif
Other DBs
NCBI-GeneID:
106391365
NCBI-ProteinID:
XP_013687441
UniProt:
A0A078GQU0
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Position
C6:complement(20564059..20565399)
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AA seq
329 aa
AA seq
DB search
MARFSVSGGDDGEGSSNHQSRKRQRLPSIDEDEETAGSSGEEDEEDDRQIESMSDDSDRE
VVIEEARRIAEDPVTSQISSSKDSSLSVTLLDPDVLDCPICCEPLKAPIFQCDNGHLACS
VCCAKVRNICPSCTLPVGYIRCRAMEKVIETSRVSCTNAKYGCKEKMLYGNRFSHEKLCV
FPPCSCPVLNCNYTGYYKDLNSHVRAKHKDEVIPFVWDVSVTIRLDKTTILQEEKDGEVM
VVQVFRGLHVVYVVVTCIAPSAREVGCFSYYLVTVPLAVDGSLVQRSMMKNIQKLSNEQP
EDGFMVIPSYMLSGSSRILLGRGRAYGHA
NT seq
990 nt
NT seq
+upstream
nt +downstream
nt
atggcgagattctcagtttctggaggagacgacggagaaggatcaagcaaccatcaatcc
cgcaaacggcagcgacttccttccatcgatgaagatgaagaaacagccggaagttccggt
gaagaagacgaagaagatgatcgtcaaattgaatccatgagcgatgacagcgatcgtgaa
gtggtaatagaagaggcaagacgaattgctgaagatcccgtaacaagccagatctcttcg
agcaaagattcttctctttccgtaacgcttttggatccagatgttctcgattgccctatt
tgctgcgagcccctcaaggctcccatctttcagtgtgataatggtcatctagcttgttct
gtgtgctgcgccaaagtcaggaacatatgtccgtcctgcacgttacccgtcggttatatt
cgctgcagagccatggagaaggtcatagaaacatctagagtctcatgtaccaacgccaag
tacgggtgtaaggagaaaatgttatatggtaatcgatttagccacgagaagctttgtgtt
ttccccccgtgttcctgccccgtacttaactgcaactacactggctattacaaggatctc
aacagccacgtacgtgctaaacacaaagacgaggtgattccttttgtctgggacgtttct
gtaaccattagattggataagaccacaatccttcaggaagaaaaggatggggaagtgatg
gtagttcaagttttcaggggtttgcacgttgtgtatgtcgttgtgacctgtattgcacct
tcggcacgggaagtgggatgcttctcatactatctggtaactgtacctctagccgtcgat
ggctcactagtccagcgatccatgatgaagaacattcagaaattgagtaatgaacaacca
gaagatggtttcatggtgattccttcctatatgttgtctggtagttcgcggattttactt
ggccgtggccgggcttatggtcatgcctga
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