Brassica napus (rape): 106391532
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Entry
106391532 CDS
T04128
Name
(RefSeq) serine/threonine protein phosphatase 2A 55 kDa regulatory subunit B beta isoform
KO
K04354
serine/threonine-protein phosphatase 2A regulatory subunit B
Organism
bna
Brassica napus (rape)
Pathway
bna03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
106391532
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
bna01009
]
106391532
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bna03019
]
106391532
03036 Chromosome and associated proteins [BR:
bna03036
]
106391532
Protein phosphatases and associated proteins [BR:
bna01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
106391532
Messenger RNA biogenesis [BR:
bna03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
106391532
Chromosome and associated proteins [BR:
bna03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
106391532
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_CDC20-Fz
WD40_WDHD1_1st
WDR55
Beta-prop_RIG_2nd
Beta-prop_EML
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
ComGF
Motif
Other DBs
NCBI-GeneID:
106391532
NCBI-ProteinID:
XP_013687659
UniProt:
A0A817AR32
LinkDB
All DBs
Position
A8:20440883..20445628
Genome browser
AA seq
512 aa
AA seq
DB search
MNGGGGGDGAASSGGGGGGPPPPLEWRFSQVFGERTAGEEVQEVDIISAIEFDKSGDHLA
TGDRGGRVVLFERTDNKDNGGSRRDAEQMDYTVRHPEFRYKTEFQSHEPEFDYLKSLEIE
EKINKIRWCQPASGALFLLSTNDKTIKYWKVQEKKIKKISEMNIDPSKTPGQPSSSSPPP
IVANGVHADPAHDYLSKFSFPPGGLPSLRLPVVTSLETSLVARCRRVYAHAHDYHINSIS
NSSDGETFISADDLRVNLWNLEISNQSFNIVDVKPTNMEDLTEVITSAEFHPIHCNMLAY
SSSKGSIRLIDMRQSALCDSHTKLFEEPEAPGSRSFFTEIIASISDIKFSKDGRYILSRD
YMTLKLWDINMDSGPVASYQVHEHLRPKLCDLYENDSIFDKFECCLSGDGLRVATGSYSN
LFRVFGASQGSTEAATLEASKNPMRRQIQTPARPSRTISSMTRMVRRGSESPGAEANGNG
YDFTNKLLHMAWHPTENSIACAAANSLYMYYA
NT seq
1539 nt
NT seq
+upstream
nt +downstream
nt
atgaacggtggtggtggtggtgacggtgctgcttctagtggtggtggtggtggtggtcct
cctccgcctttagagtggagattctctcaggtcttcggcgagcgaaccgctggagaagaa
gtccaggaagttgacatcatttcagctattgaatttgataaaagtggagaccatctagca
actggcgaccgtgggggacgagtggttctttttgagaggacggataataaagataatggt
gggtccaggagagatgctgagcagatggactacacagttaggcatcctgagtttcgatat
aaaacagaatttcagagtcatgaaccagagtttgactatctcaagagtttggaaatagaa
gagaaaatcaacaaaatcaggtggtgtcagccagcaagtggtgcattgtttctgctttcc
acaaatgataaaaccataaagtattggaaggtacaagagaagaagatcaagaaaattagt
gaaatgaatattgatccgtcgaaaactccaggtcaaccgagttcaagtagccctcctcca
atagttgctaatggagtacatgccgatccagcacatgactacctgagcaaattttccttc
cctccaggaggccttccatctctgcgtttgcctgtggtgactagcctggagacaagcctt
gtggcaagatgccgaagagtgtatgctcatgcacatgattaccatattaattcaatctca
aacagcagcgatggagaaaccttcatttcggccgatgatctgcgcgtaaatctctggaat
ctggaaatcagcaaccagagcttcaacattgttgatgttaagcctacaaacatggaggac
ttaactgaggttattacatctgccgagtttcatccaatccattgtaatatgctcgcatat
agcagctcaaaaggctccatccgtttgattgatatgaggcaatcagctctgtgtgattct
cacactaaattgtttgaagaaccggaagcacctggttccagatcatttttcacagagata
attgcctcaatttcagatattaaattttcaaaggatgggagatacatacttagtcgcgat
tatatgaccctcaagctgtgggacataaacatggattctggtccggttgcatcttaccag
gttcatgaacatctgagacccaagctatgcgatctatatgaaaatgactccatctttgat
aaattcgagtgttgcctaagtggtgatggactgagggtggcaacaggctcttacagcaat
ctattccgtgtatttggagcgtctcaaggaagtactgaagctgcaactttggaagctagc
aaaaaccctatgaggaggcaaatccagacacctgcaagaccttccagaactattagcagc
atgacacgaatggttagacgaggatcagagagtccaggagcagaggcgaatgggaacgga
tatgacttcacaaataagttgctgcacatggcttggcacccaacagagaactcaattgct
tgtgcagcagcgaacagcttgtacatgtactatgcatga
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