Brassica napus (rape): 106391559
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Entry
106391559 CDS
T04128
Name
(RefSeq) E3 ubiquitin-protein ligase HOS1-like
KO
K16278
E3 ubiquitin-protein ligase HOS1 [EC:
2.3.2.27
]
Organism
bna
Brassica napus (rape)
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
bna04121
]
106391559
Enzymes [BR:
bna01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
106391559
Ubiquitin system [BR:
bna04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
106391559
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ELYS
zf-C3HC4_3
HEAT_2
Serine_rich
Motif
Other DBs
NCBI-GeneID:
106391559
NCBI-ProteinID:
XP_013687693
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All DBs
Position
C4:59811901..59816561
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AA seq
929 aa
AA seq
DB search
MDTNGSASASASASASAERSMNLPPQHPDYASKPVQEALMHLASTNLRDLCNEAKAERCR
ATRDLTSCGRSVRYALNPCGHASLCRECCERFDLCPICRSTLPRSGDKLRLRLYYECVEA
GLISGTPEDASQDEDEDGVHRLYSLFDVALNNNLISVVCYYITNVCMDEAAVSSDPVIAF
LLDEVVVKDWVKRTFRSILAGLQEIYSLETKEMQGWLDKLLKYSKQVAGICSVLEVMESA
FKGSVSPQLQDVEKLKDNIGKTKQHLDIMIWCIRHGFLHDVKSRYSNFTSWKALVLERKS
NAIKRAWPDAVDQSSDCCVQGASLFIEDALENLEREPEYSQDIGADLGVGCLQNDERSFL
RSKIEGTSGSYPFENLRTAADKLFLHGSSDLVVAKQAIFLYYLFDRHWTTPEEHWKHIVD
DFAATFGITRHSLLESFVFYLLDDPSEEALQEACRTLPEICGPETYPKVAQVLLERENPE
AALLVLRWSGRDGASELVSIGEAVTAVRVRVECGLLSEAFTYQRTLCLKVKENELKNGAV
KHVSDDGGDSLSWTEWMEILVNEFCCLSIRRNVVDRIIELPWNPDEEKYLHRCLLDSATD
DPSSAVGSLLVVFYLQRYRYIHAYQVDLRLQKIEEAFLSENRIGEEVMSRMQSQSHWRKE
LIDKAIDILPAIQQQQVRSGQFSEMEDTSESAYEAATNTDLPEAKQSSVPVSTNSVFLQR
AKDGGARVPVANNASSPFQPSRLIGSASIDISHGKLFTSANRGQKSEVRSITKTLKFGEA
STPFKDLNRARGNSKHKGRRTEDTSPEINVDRFMDSPYLTANNPVTMEPRSRSKHLNGSA
QKPESTFFGVRMQQDREHPSHLDDPMDMSSSLKNNNNVLATESRNKSGGLRWRSDEGSDE
KSEPMWGMEPTSSGSMPVKGRRTRRFTAR
NT seq
2790 nt
NT seq
+upstream
nt +downstream
nt
atggacacgaacggctccgcctccgcctccgcctccgcctccgcctccgccgagagatcg
atgaatctccctccgcaacatcctgattacgctagcaaacctgttcaggaggcgttgatg
catttggcatccaccaacctcagagatctgtgtaacgaggcgaaagctgagcgttgccgt
gccaccagagacttgacgagctgtgggagatctgtgcgctatgcgttgaatccgtgtggg
catgcttcattgtgcagagagtgttgtgagaggtttgatctttgtccaatctgtagaagt
acactaccaagatctggagataagcttcggcttcgtctctactatgagtgtgttgaagct
ggtttaatctccggaacacctgaagatgcatcacaggatgaagatgaggatggtgttcat
cgcctttattctctgttcgatgttgccttgaacaataatttgatatctgtggtttgctat
tatatcaccaatgtttgtatggatgaggcagctgtatctagtgacccggtcattgctttc
ttgctggatgaagttgttgtcaaagactgggtcaagcgtacattcaggagcatcttagct
gggcttcaagaaatctatagtcttgaaacgaaggagatgcaagggtggttagataaactc
ctgaagtattcgaaacaagtggctggcatatgtagtgtgcttgaagttatggagtcagct
tttaagggttctgtttcacctcagcttcaagacgtggagaagcttaaggataacattgga
aaaacaaagcagcatctggacattatgatctggtgcataagacacggatttctgcatgat
gtgaagtctcggtattctaatttcacatcgtggaaggctctggtgctcgaaaggaaatca
aatgcaattaagcgtgcatggcctgatgccgtagatcagtcttcagattgctgtgtacag
ggtgcttccctttttatcgaggatgctttggaaaatcttgagagagagccagagtacagt
caagacataggggcagacctaggagttggatgtttgcagaacgatgaaagatcatttctt
aggtccaaaatagagggaacttcaggatcttacccatttgagaatcttagaacagctgct
gataaactctttttacatggcagctcagatttggttgttgcaaagcaagccatttttctt
tattacttgtttgatcggcactggactacccctgaagaacattggaagcacattgtagat
gattttgctgctaccttcggcataaccaggcattcattgttggagtcttttgtattttat
cttcttgatgatccctcagaagaggcactccaggaagcttgtagaactcttcctgaaata
tgtggtccagaaacatatcccaaggttgcacaagtcttgttagaaagggaaaatcctgaa
gcagctcttttggtcttgcgttggtctggtcgtgatggcgcatcagaactggtttcaatt
ggtgaagctgtcacagctgttcgtgtgagagtggaatgtggtcttttgagtgaggcattc
acataccaaaggactctctgcctgaaagtgaaggaaaatgaattgaaaaatggagctgta
aaacatgtgtctgatgatggaggagacagcttgagttggacggaatggatggagatactt
gtcaacgaattttgctgtctgtctattaggagaaacgtggttgatcgaatcattgagttg
ccgtggaacccagatgaagagaaatatctgcacagatgcttattagattctgcaactgat
gacccctcatcagctgtgggtagtcttttggttgtcttctatcttcagcgctaccgttac
atccatgcgtaccaagtcgatcttaggctccagaaaattgaagaggctttcttatccgaa
aatcgaattggggaagaagtaatgtccagaatgcaatcacagagtcattggaggaaagag
ttaattgataaagccatagatatactaccagcaatacagcagcagcaagtcagatctggt
cagttttctgagatggaagatacctccgaaagtgcttatgaagcagcgacaaacactgat
cttccagaagcaaaacaatcaagtgttcccgtttccactaattctgtatttctccaacgg
gctaaggacggtggcgctagagtgccagtggctaataacgccagcagtccttttcaaccc
agtcgtttgataggttccgcttccattgatatctcccatggaaagctatttacaagcgca
aatagaggacagaagagtgaagtcagaagcataaccaagactctgaaattcggtgaagcg
tccacaccgttcaaagatcttaacagagctcgtgggaacagcaagcacaagggaagaagg
actgaagacacatctccagaaataaacgttgatagattcatggactctccttatctcaca
gctaataatcccgtaacaatggaacctcgcagtcgcagcaagcatctcaatggatctgca
cagaaaccggaatccactttctttggcgtaagaatgcaacaagatagagaacacccgagc
catttggatgatccaatggacatgtcttcaagcttgaagaacaacaacaatgtattggcc
acggagagcagaaataaaagtggaggattaaggtggcgatcagatgaaggaagcgatgag
aaaagtgaaccgatgtggggcatggagccgactagttccggttccatgccggttaaggga
aggaggacacgtagattcactgcaagatga
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