KEGG   Brassica napus (rape): 106391623
Entry
106391623         CDS       T04128                                 
Name
(RefSeq) autophagy-related protein 18c
  KO
K22991  WD repeat-containing protein 45
Organism
bna  Brassica napus (rape)
Brite
KEGG Orthology (KO) [BR:bna00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:bna04131]
    106391623
Membrane trafficking [BR:bna04131]
 Autophagy
  Other autophagy associated proteins
   Others
    106391623
SSDB
Motif
Pfam: PROPPIN WD40_CDC20-Fz WD40 WD40_Prp19 Beta-prop_EML_2 WD40_WDHD1_1st BCAS3_WD40 WD40_MABP1-WDR62_2nd Beta-prop_Vps41 WDR55 Beta-prop_IFT140_2nd Beta-prop_WDR19_1st Beta-prop_WDR90_POC16_2nd EIF3I NBCH_WD40 Beta-prop_EML Beta-prop_IFT122_1st
Other DBs
NCBI-GeneID: 106391623
NCBI-ProteinID: XP_013687761
UniProt: A0A078FJZ6
LinkDB
Position
C4:60381917..60399105
AA seq 408 aa
MSSTASSPQRVLQPGGYNGNDSRTSSTSSSFLRPELESSETEEAELVSVSWNQDSSCFAA
GTSHGFRIYNCEPFKETFRRDLKNGGFRIVEMLFRSNILALVGGGPNSQYPSTKVLIWDD
HQSRCISEFSFRSEIRAVKLSRDWIVVVLEHKIYVYSFVDLRLLLQIETHANPRGLCCLS
HDSDTSVLACPGLLRGEIRVEHFGLNMVQTVNAHDASIACMTLTLDGLLLATASTKGTLI
RIFNTMDGTRLQEVRRGVDRADIYSIALSPNVQWLAVSSDKGTVHIFSLRVRVVGEDSDS
TESAALLTQQTYSNSLQGLVSPATGTNPGSSLSFMRGVLPKYFSSEWSFAQFHVSEVTQF
FAAFGSHNTVAITGMDGSFYRCSFDPVNGGEMVQLEHIHFLKTDNRPR
NT seq 1227 nt   +upstreamnt  +downstreamnt
atgagttcaaccgcttcgagtccccaaagagtcctgcaaccaggtggttataatggtaat
gactctcgaaccagcagcacttctagttcttttctgcgtccagagttagaatccagcgaa
accgaagaagcagagctagtttctgtctcctggaaccaggactccagttgtttcgctgct
ggaacaagtcatggcttccgcatatacaactgcgagcctttcaaagaaactttcagacgc
gacctgaagaacggtggtttcagaatcgtggagatgcttttccgaagcaacatcttggcc
cttgttggcggtggacctaactctcagtacccttcgaccaaagtcctgatctgggatgat
caccagagccgctgcatcagtgaattttcttttaggtctgagattcgtgcggtgaagtta
agtagggattggattgttgttgttcttgagcataagatatacgtctacagtttcgtggac
ctgaggcttcttcttcagattgaaactcacgcgaatccgagaggattgtgctgcctttct
catgactcggatacgtctgtgctggcttgccctggtttacttcgaggagagattcgagtt
gaacattttgggcttaacatggtgcaaaccgtaaatgcgcatgacgctagtattgcgtgt
atgaccttgacgcttgatggtttgttgctcgcaactgctagtacaaagggcacacttatt
agaatcttcaacacaatggacggaactcgtttgcaagaggtaagaagaggagtagacaga
gcagatatttatagcattgcgctttcaccgaacgtgcagtggctggcagtatcaagcgac
aaggggactgttcacattttctctcttagagttagggtagttggggaggattctgattcc
actgagagtgcagctctcttgactcaacaaacttattctaattctctgcaaggccttgtt
tctccagccactggtaccaaccccggttcgtcattgtcttttatgagaggtgttctacca
aagtatttcagctcggaatggtcatttgcacagttccatgtatcagaagtcacacaattc
ttcgcagcatttggcagtcacaacacggttgctattaccggcatggatggaagtttctac
agatgcagctttgatcctgtgaatgggggagagatggtgcagcttgaacatatccacttt
ctaaagactgataaccgcccaagataa

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