Brassica napus (rape): 106391623
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Entry
106391623 CDS
T04128
Name
(RefSeq) autophagy-related protein 18c
KO
K22991
WD repeat-containing protein 45
Organism
bna
Brassica napus (rape)
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
bna04131
]
106391623
Membrane trafficking [BR:
bna04131
]
Autophagy
Other autophagy associated proteins
Others
106391623
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PROPPIN
WD40_CDC20-Fz
WD40
WD40_Prp19
Beta-prop_EML_2
WD40_WDHD1_1st
BCAS3_WD40
WD40_MABP1-WDR62_2nd
Beta-prop_Vps41
WDR55
Beta-prop_IFT140_2nd
Beta-prop_WDR19_1st
Beta-prop_WDR90_POC16_2nd
EIF3I
NBCH_WD40
Beta-prop_EML
Beta-prop_IFT122_1st
Motif
Other DBs
NCBI-GeneID:
106391623
NCBI-ProteinID:
XP_013687761
UniProt:
A0A078FJZ6
LinkDB
All DBs
Position
C4:60381917..60399105
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AA seq
408 aa
AA seq
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MSSTASSPQRVLQPGGYNGNDSRTSSTSSSFLRPELESSETEEAELVSVSWNQDSSCFAA
GTSHGFRIYNCEPFKETFRRDLKNGGFRIVEMLFRSNILALVGGGPNSQYPSTKVLIWDD
HQSRCISEFSFRSEIRAVKLSRDWIVVVLEHKIYVYSFVDLRLLLQIETHANPRGLCCLS
HDSDTSVLACPGLLRGEIRVEHFGLNMVQTVNAHDASIACMTLTLDGLLLATASTKGTLI
RIFNTMDGTRLQEVRRGVDRADIYSIALSPNVQWLAVSSDKGTVHIFSLRVRVVGEDSDS
TESAALLTQQTYSNSLQGLVSPATGTNPGSSLSFMRGVLPKYFSSEWSFAQFHVSEVTQF
FAAFGSHNTVAITGMDGSFYRCSFDPVNGGEMVQLEHIHFLKTDNRPR
NT seq
1227 nt
NT seq
+upstream
nt +downstream
nt
atgagttcaaccgcttcgagtccccaaagagtcctgcaaccaggtggttataatggtaat
gactctcgaaccagcagcacttctagttcttttctgcgtccagagttagaatccagcgaa
accgaagaagcagagctagtttctgtctcctggaaccaggactccagttgtttcgctgct
ggaacaagtcatggcttccgcatatacaactgcgagcctttcaaagaaactttcagacgc
gacctgaagaacggtggtttcagaatcgtggagatgcttttccgaagcaacatcttggcc
cttgttggcggtggacctaactctcagtacccttcgaccaaagtcctgatctgggatgat
caccagagccgctgcatcagtgaattttcttttaggtctgagattcgtgcggtgaagtta
agtagggattggattgttgttgttcttgagcataagatatacgtctacagtttcgtggac
ctgaggcttcttcttcagattgaaactcacgcgaatccgagaggattgtgctgcctttct
catgactcggatacgtctgtgctggcttgccctggtttacttcgaggagagattcgagtt
gaacattttgggcttaacatggtgcaaaccgtaaatgcgcatgacgctagtattgcgtgt
atgaccttgacgcttgatggtttgttgctcgcaactgctagtacaaagggcacacttatt
agaatcttcaacacaatggacggaactcgtttgcaagaggtaagaagaggagtagacaga
gcagatatttatagcattgcgctttcaccgaacgtgcagtggctggcagtatcaagcgac
aaggggactgttcacattttctctcttagagttagggtagttggggaggattctgattcc
actgagagtgcagctctcttgactcaacaaacttattctaattctctgcaaggccttgtt
tctccagccactggtaccaaccccggttcgtcattgtcttttatgagaggtgttctacca
aagtatttcagctcggaatggtcatttgcacagttccatgtatcagaagtcacacaattc
ttcgcagcatttggcagtcacaacacggttgctattaccggcatggatggaagtttctac
agatgcagctttgatcctgtgaatgggggagagatggtgcagcttgaacatatccacttt
ctaaagactgataaccgcccaagataa
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