Brassica napus (rape): 106391665
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Entry
106391665 CDS
T04128
Name
(RefSeq) DNA-(apurinic or apyrimidinic site) endonuclease, chloroplastic-like isoform X1
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
bna
Brassica napus (rape)
Pathway
bna03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
106391665
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bna03400
]
106391665
Enzymes [BR:
bna01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
106391665
DNA repair and recombination proteins [BR:
bna03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
106391665
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
SAP
Exo_endo_phos_2
Ig_N_CWD1
Motif
Other DBs
NCBI-GeneID:
106391665
NCBI-ProteinID:
XP_013687815
LinkDB
All DBs
AA seq
488 aa
AA seq
DB search
MNKVLQLGLQSSVVQAAKFPVVVPFRSLRFASSIVGVRVGTSSFNKRLMSNATSKSVPLS
INNIKGKPMKGSDNDIEAMTVQELRATLRKLGLPVKGLKKELISTLQLHMDNSSPDESCG
AEKETTSSTLSETVTIKRKIRNQEEANDEAYGNDNGEKKAKQSTEKNLKVKVSSKEEEAS
LTIAISSSNQSEPWTVLAHKKPEKDWKAYNPKTMRPPSLPEGTKSVKIMTWNVNGLRALL
KLESFSALQLAQREDFDVLCLQETKIQVKDVEEIKKALIDGYDHSYWSCSVSKLGYSGTA
IISRIKPLSVRYGTGLSGSDHDMEGRIVTVEFDSFYLINTYVPNSGDGLKRLSYRVEEWD
RTLSNYIKELEKSKPVVLTGDLNCAHEEIDIYNPAGNKRSAGFTIEERQSFGENFLEKGF
VDTFRKQHPGVVGYTYWGYRSGARKTNRGWRLDYYLVSESIAANVHDSYILPDVNGSDHC
PIGLILKL
NT seq
1467 nt
NT seq
+upstream
nt +downstream
nt
atgaacaaggttcttcagttaggtctccagagctccgtcgtccaagccgccaagtttccg
gtggtggtgccctttaggagcttaagatttgcttcatcaatcgttggtgttagagtagga
acaagtagtttcaacaagaggcttatgtcaaatgctacatcaaagtctgtacctttatct
atcaacaacatcaagggaaagccaatgaagggaagtgataatgacattgaggcgatgacg
gttcaagaacttagagccacattgaggaaacttggactacctgtgaagggactcaaaaaa
gaacttatctcaactttacaacttcatatggacaatagttcaccagatgaaagttgtggt
gcagagaaggagactacttcatccaccctttcagagactgtcactatcaaaagaaaaatc
agaaaccaggaagaggctaatgatgaagcttatggcaatgacaatggagagaagaaagct
aagcagtctactgagaaaaacttgaaagttaaagtttcttcaaaagaggaagaagcatca
ctgaccattgccatctcatcctccaatcaaagtgaaccgtggacggtacttgctcataag
aagcctgagaaagactggaaagcttacaacccaaagacaatgagacctccttctctacca
gagggtaccaagtctgtgaagatcatgacttggaacgttaatggactgagagctttattg
aagttagagagcttctctgctcttcagcttgcacaaagagaagattttgatgtgttgtgc
ttacaggagactaaaatccaggtgaaggatgttgaggagatcaagaaagctcttatagat
ggatatgatcatagttactggtcctgcagcgtctctaagcttggttactctggaactgct
attatctcacggataaagccactctcggttagatatggtactggtctatctggatcagac
catgacatggaaggacgcattgtgactgttgagttcgactcattctacttgataaacact
tatgttcctaactctggagatggcttgaaaagactgtcatacagggttgaagaatgggat
cgaactctcagtaattacatcaaagagctggagaagtctaaacctgtagtcttgactggt
gatttaaactgtgctcatgaagaaatcgacatctacaatcctgcggggaacaaaagaagt
gctggtttcacaatagaagaaagacaatcatttggagaaaacttcttggagaagggcttt
gtggatacttttagaaagcagcatcctggtgttgttggttatacttattggggttatcgc
agtggtgcacgcaaaaccaatagaggatggagactggactactacttggtgtctgaatca
attgcagccaatgtccatgattcttacattctccctgatgtcaatggcagtgatcattgc
cctattggccttattctcaagctctga
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integrated database retrieval system
