Brassica napus (rape): 106391710
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Entry
106391710 CDS
T04128
Name
(RefSeq) cyclic nucleotide-gated ion channel 1-like
KO
K05391
cyclic nucleotide gated channel, plant
Organism
bna
Brassica napus (rape)
Pathway
bna04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
106391710
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
bna04040
]
106391710
Ion channels [BR:
bna04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
106391710
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GFIT
Motif
Pfam:
Ion_trans
cNMP_binding
IQ
Motif
Other DBs
NCBI-GeneID:
106391710
NCBI-ProteinID:
XP_013687868
UniProt:
A0A078GPA3
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Position
A2:6529264..6532459
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AA seq
711 aa
AA seq
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MNFRQEKFVRFQDWKSDKTSDVEYSGRNEPPNGIFRRTITSISDKFHRSSARIKTFRRTY
KSYSFKEAVSKGIDSSHKILDPQGPFLQRWNKIFVLACIIAVSLDPLFFYVPVVDDAKKC
LGLDNKMEITASVLRSFTDVFYVIHIIFQFRTGFIAPSSRVFGRGVLVEDTRQIAIRYLS
SHFIIDILAVLPLPQVVILIIIPHMRGSRSLNTKNLLKFIVFFQYIPRFIRIYPLYKEVT
RTSGILTETAWAGAAFNLFLYMLASHVFGAFWYLFSIERETVCWKQACNRNRNICDITSL
YCDHKAAGGNAFLNASCPVQTPNATLFDFGIFLNALQSGVVESQDFPQKFFYCFWWGLQN
LSSLGQNLKTSTYIWEICFAVFISISGLVLFSFLIGNMQTYLQSTTTRLEEMRVKRRDAE
QWMAHRLLPESLRKRIRRYEQYKWQETRGVDEENLLSNLPKDLRRDIKRHLCLALLMRVP
MFEKMDEQLLDALCDRLQPVLYTEESYIVREGDPVDEMLFIMRGKLLTMTTNGGRTGFFN
SEHLGAGDFCGEELLTWALDPHTSSNLPISTRTVRALVEVEAFALKADDLKFVASQFRRL
HSKQLRHTFRFYSQQWRTWAACFIQAAWRRHVKKKMEESLKEEENRLQDALAKEACGSSP
SLGATMYASRFAANILRTIRRSGSVRKPRMPERMLLQKPAEPDFNSDDYCI
NT seq
2136 nt
NT seq
+upstream
nt +downstream
nt
atgaatttccgacaagagaagtttgtgaggtttcaagactggaagtccgacaaaacctcc
gacgtcgaatactccgggagaaacgagccgccaaacggaatcttccggagaacgatcacc
tcaatctccgacaagttccacagaagctcggcgaggatcaaaacgttcaggagaacatac
aagtcctactctttcaaagaagccgtctccaaagggatcgattcatctcacaagatcctc
gacccgcagggacctttccttcagagatggaacaagatcttcgtgttggcttgcatcatc
gccgtttctctagaccctttgttcttctacgtccccgtggtcgacgacgccaagaagtgt
ctcggtcttgataacaagatggagataaccgctagcgtcttgcgctcgttcactgatgtc
ttctacgtgattcacatcatttttcagttccgtactggcttcatcgctccttcctctcgt
gtctttgggagaggtgttcttgttgaggacacgaggcagatcgctatacgttacttgtct
tcgcatttcattattgacattctcgctgttcttcctcttccacaggtggtgattttgatt
atcattccgcatatgagaggctcaaggtctttgaacacgaagaatctgttgaagtttata
gtcttcttccaatacataccgaggtttatcagaatctatccgctctacaaggaagttact
agaacctcagggatactaaccgagacagcttgggcgggagctgctttcaatctcttcctc
tacatgcttgctagtcatgtgtttggtgctttttggtacttgttctctatcgagcgcgaa
accgtgtgttggaaacaagcgtgcaacagaaacaggaacatctgcgacatcacttcgctg
tattgtgaccataaagctgcaggaggcaacgctttcctcaacgcgtcttgtccggttcag
acgccaaacgcaacgcttttcgactttgggatattccttaacgctcttcagtctggtgta
gtggaatctcaagatttccctcagaagttcttttactgcttctggtggggtcttcaaaac
ctcagttcgctaggccaaaaccttaaaacaagtacatacatttgggagatctgttttgct
gtcttcatttctatctcagggctggttctgttctccttcttgattggtaacatgcagacg
tatctgcaatcaacaaccacaaggttggaggagatgagagtcaagagaagagacgcagag
cagtggatggctcaccgtttgctccctgagagtctgcgaaaaagaatcagaagatacgag
cagtacaagtggcaagagactagaggcgttgacgaagagaatcttctcagtaatctccct
aaagaccttagacgcgacatcaaacgccatctctgtctcgcccttctcatgagggtccca
atgtttgagaaaatggacgagcagcttctcgatgctctctgcgaccgtttgcaaccagtg
ctgtacacagaggaaagctacatcgtaagagaaggagaccccgtagacgaaatgctcttc
ataatgcgtgggaagctactgacaatgacaacaaacggtggaagaacaggcttcttcaac
tcagagcacctcggagccggcgacttctgcggcgaggagcttctaacatgggccttagac
ccacacacatcctctaacctcccaatctcaacgagaaccgtccgagctctcgttgaagtg
gaagctttcgcgcttaaagctgacgacctcaagttcgttgcttctcagttcagacgtctc
cacagcaaacagctgagacatactttcagattctactcgcagcagtggaggacttgggcg
gcttgcttcatacaagcagcgtggagaagacacgtgaagaagaagatggaagagtctctt
aaagaagaagagaatcggttgcaggacgccttggccaaggaagcttgtggaagctccccg
agcctcggcgccaccatgtatgcgtcacggtttgctgctaatatcttaaggactatacgt
aggagcgggtcggtaaggaagccgaggatgccggaacgaatgctgcttcagaaaccagca
gaaccagatttcaatagtgatgattactgtatatga
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